PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00091.1.g01040.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 706aa    MW: 74064.2 Da    PI: 10.8755
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00091.1.g01040.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like72.65.8e-23530589251
                       G2-like   2 prlrWtpeLHerFveaveqLGGse..........kAtPktilelmkvkgLtlehvkSHLQ 51 
                                   pr+rWt++LH+rFv+ave LGG+e          +AtPk++lelm+vk+Ltl+hvkSHLQ
  Zjn_sc00091.1.g01040.1.am.mk 530 PRMRWTSTLHARFVHAVEVLGGHErewsppagqfRATPKSVLELMDVKDLTLAHVKSHLQ 589
                                   9********************99844444444446************************* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.3E-10527589IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.7E-22528589IPR009057Homeodomain-like
TIGRFAMsTIGR015571.7E-15530589IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 706 aa     Download sequence    Send to blast
MLVHGLGSRH IAGRWPVSIE ATKRSNGIQF PSLKRKSLHS NQAADRGASI RRQRQRQFMS  60
AAAAQLLVND ASSLITALIM PGGGGAAVSS WSKPRSSLCL PGGMGNGTGL KLAATVNLLH  120
VSTWTHSGGV KLGSLCPCGH VPKDKRKKKN GIDGAINPVD SKVAGCRLLR ETHGKPARSY  180
MATETAAVRS CERSMVQAQL LELPDTKHTE KEAPHSGDVD TTKQKQKQTP PENARTFLSL  240
ASCAAKHFPF HPSLPYLSKG RGSSPLAPRR RERGAASMEA TASAPDLSLH ISLPSGNAAS  300
PSSAPGLGAG GVVGGRGAAG SPGGDPWRRL NGSTASTELS LSPPQRQQEG AASALPWRLR  360
PSTAANAPSS SSSASSAEAA AFLPVTVPRL SLDAAASAEA ARGRPINGVP VYSSPGAGSS  420
PFLGAGDYRQ RQPKVGLYNP YPSSAWPSSL RSTTAAVPAP VDTTTAAFHH SPSAYHRMLS  480
GTGRLHLHGA LADTLRSYGA GHQQYFGSSL ASSRYVPRFP AASRRGMRAP RMRWTSTLHA  540
RFVHAVEVLG GHEREWSPPA GQFRATPKSV LELMDVKDLT LAHVKSHLQA SELSPLAQQL  600
KLNARERKPG VLVHLRLSRL TMQAAAIPRE SEEGEPRPID GGGSGDDDLP NAEQAQSAGD  660
LNRQPFAGLG RSASSEGATS QFGGGDVECS SADDSDGSRV RSTSSR
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9350031e-56EU935003.1 Zea mays cultivar B73 kanadi1 (kan1) mRNA, complete cds.
GenBankJX4699821e-56JX469982.1 Zea mays subsp. mays clone UT3342 G2-like transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025820100.11e-111probable transcription factor RL9 isoform X2
TrEMBLA0A3L6RKZ81e-118A0A3L6RKZ8_PANMI; Putative transcription factor RL9
STRINGPavir.Fb00812.1.p1e-121(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25583787
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.17e-28G2-like family protein