PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00089.1.g01000.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 464aa    MW: 50470.5 Da    PI: 5.4025
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00089.1.g01000.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.29.7e-30230286259
                                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                      Dg+nWrKYGqK+vk+s+++rsYYrCt  gC +kkkve++  d++vvei+Y+g Hnhe
  Zjn_sc00089.1.g01000.1.sm.mkhc 230 ADGFNWRKYGQKQVKSSDNSRSYYRCTNLGCLAKKKVEHCP-DGHVVEIIYRGAHNHE 286
                                     7****************************************.***************8 PP
2WRKY33.49e-11400421122
                                     ---SS-EEEEEEE--TT-SS-E CS
                            WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                                     ++Dgy+WrKYGqK vkg+++pr
  Zjn_sc00089.1.g01000.1.sm.mkhc 400 VNDGYRWRKYGQKIVKGNPNPR 421
                                     58*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.2E-26223288IPR003657WRKY domain
PROSITE profilePS5081121.368224288IPR003657WRKY domain
SuperFamilySSF1182901.83E-23226288IPR003657WRKY domain
SMARTSM007741.1E-32229287IPR003657WRKY domain
PfamPF031063.6E-22231286IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.0E-9393421IPR003657WRKY domain
SuperFamilySSF1182901.83E-8395422IPR003657WRKY domain
PROSITE profilePS5081113.081395421IPR003657WRKY domain
SMARTSM007741.3E-4400445IPR003657WRKY domain
PfamPF031067.6E-7401421IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    Send to blast
MAAGDPEPEP AVENRPSVEE AEETRPPPAE APRSPTEEKP PASGAAAEVD THPPPEPAGS  60
SPGSSAYVEK EVEVEAKTGA KDMKAEDKEK EKGKVEAKVV EVAEVKVEAK EKEVEPTRRP  120
AGSSAEAPIL AVPMVAVPCF IAPPGFQGQF VMSHQAALAS VTAQAQMQLQ SPVSSAYSEA  180
PSSPFYIAPK AIMSLQQAPS AAEGTVCTPT ADKLSSSESK SDHVVVNMVA DGFNWRKYGQ  240
KQVKSSDNSR SYYRCTNLGC LAKKKVEHCP DGHVVEIIYR GAHNHEPPQK TRFSKERVTP  300
IRVPSGDETL RLVNTEIVDS CTPTYKLDQR TVTETSENAS EQQLFCSSDC EGDAGNRSED  360
EHPSAEPLPK RRTVECSTPN LTPVLKTVRE QKIIVQAGKV NDGYRWRKYG QKIVKGNPNP  420
RWVKPLINGV ITVVHMVDVL FNDLSTTDNH WAIQHTGFDI SDND
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004973142.10.0probable WRKY transcription factor 32
TrEMBLA0A368RK160.0A0A368RK16_SETIT; Uncharacterized protein
STRINGSi013488m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP58203455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.12e-47WRKY DNA-binding protein 4