PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Zjn_sc00088.1.g02350.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 345aa MW: 37053.5 Da PI: 9.543

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00088.1.g02350.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	35.4	2.4e-11	72	97	2	27
G2-like 2 prlrWtpeLHerFveaveqLGGsekA 27 pr+rWt+ LH++Fv+ave LGG+e A Zjn_sc00088.1.g02350.1.am.mk 72 PRMRWTTALHAHFVHAVELLGGHETA 97 9**********************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	4.0E-8	69	97	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence Send to blast
MSSAAATGVT PDLSLHISPP SPAAGGGATP EGLDAAQRSL RAQQRLHQPN QTAHGFKKSS 60 SSGGGKRSSR APRMRWTTAL HAHFVHAVEL LGGHETALVQ TTYVYGLQCD DQTYPSAAAL 120 LIIRRIQIRS TSIVPLPVPG PISRNCRWNL GKSQSPAEQQ QQQLEHHNAA WIQALVVQHQ 180 LPSTCRTVLP HQYIRLQPDR LFMEQRQRQK GGGAQDHREG AVAHDLAEAG RPAINQKGLS 240 APPTSLVHDA ETVVRGPPSS SNTSSSGDTA SSSDWLQQQT LLMPASTQRY GSNGAISWLT 300 STTPPPPTLE MSLGRQGWQV EQQCGGGGEF EPAPSAKDRT LLKCL

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence Send to blast

MSSAAATGVT PDLSLHISPP SPAAGGGATP EGLDAAQRSL RAQQRLHQPN QTAHGFKKSS  60
SSGGGKRSSR APRMRWTTAL HAHFVHAVEL LGGHETALVQ TTYVYGLQCD DQTYPSAAAL  120
LIIRRIQIRS TSIVPLPVPG PISRNCRWNL GKSQSPAEQQ QQQLEHHNAA WIQALVVQHQ  180
LPSTCRTVLP HQYIRLQPDR LFMEQRQRQK GGGAQDHREG AVAHDLAEAG RPAINQKGLS  240
APPTSLVHDA ETVVRGPPSS SNTSSSGDTA SSSDWLQQQT LLMPASTQRY GSNGAISWLT  300
STTPPPPTLE MSLGRQGWQV EQQCGGGGEF EPAPSAKDRT LLKCL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025805465.1	1e-45	uncharacterized protein LOC112884302
TrEMBL	A0A0A9S0A8	4e-54	A0A0A9S0A8_ARUDO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP27424	4	5

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17695.1	2e-10	G2-like family protein