PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00086.1.g02330.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 1698aa    MW: 183213 Da    PI: 9.8656
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00086.1.g02330.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-1815221572155
                           AP2    1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55  
                                    ++++GVr ++ +gr++AeIrdp    k++r++lg+f++ae+Aa+a++aa++ l+g
  Zjn_sc00086.1.g02330.1.am.mk 1522 TRFRGVRKRP-WGRYAAEIRDPA---KKARVWLGTFDSAEDAARAYDAAARTLRG 1572
                                    589*******.**********83...36*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF901233.92E-46144456IPR011527ABC transporter type 1, transmembrane domain
Gene3DG3DSA:1.20.1560.102.5E-46144451No hitNo description
PfamPF006645.3E-43149421IPR011527ABC transporter type 1, transmembrane domain
PROSITE profilePS5092938.581149437IPR011527ABC transporter type 1, transmembrane domain
SuperFamilySSF901233.14E-14493634IPR011527ABC transporter type 1, transmembrane domain
PfamPF006643.2E-15501588IPR011527ABC transporter type 1, transmembrane domain
PROSITE profilePS5092914.799503589IPR011527ABC transporter type 1, transmembrane domain
Gene3DG3DSA:1.20.1560.104.2E-11503587No hitNo description
SuperFamilySSF901232.35E-417901115IPR011527ABC transporter type 1, transmembrane domain
Gene3DG3DSA:1.20.1560.102.9E-428021120No hitNo description
PROSITE profilePS5092934.2848031107IPR011527ABC transporter type 1, transmembrane domain
PfamPF006648.6E-338781088IPR011527ABC transporter type 1, transmembrane domain
PfamPF008478.3E-1215221572IPR001471AP2/ERF domain
CDDcd000181.77E-1615221580No hitNo description
SMARTSM003801.3E-3615231586IPR001471AP2/ERF domain
SuperFamilySSF541714.71E-2115231581IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.8E-3015231580IPR001471AP2/ERF domain
PROSITE profilePS5103223.47215231580IPR001471AP2/ERF domain
PRINTSPR003671.3E-815241535IPR001471AP2/ERF domain
PRINTSPR003671.3E-815461562IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0055085Biological Processtransmembrane transport
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005524Molecular FunctionATP binding
GO:0042626Molecular FunctionATPase activity, coupled to transmembrane movement of substances
Sequence ? help Back to Top
Protein Sequence    Length: 1698 aa     Download sequence    Send to blast
MHDSPVSVGS KICFHTRVTV TADRDAMAVD SNNQRVNHNP VTVPCNVQSV PHTLYYVENC  60
EAREPCAKSI FACIIAALTG AKRGRSAARR VRCTNQLPAT SPAGRSNEMG KDNGPAPAPV  120
AAKAKRVSVM RSFASVFMHA GATDAVLMAL GLLGAMGDGF STPVMLVITS RIFNGLGGGP  180
DILTEFSAKI NKNARNLLFL AAANWVVAFL EGYCWSRTAE RQASRMRARY LRAVLRQDVE  240
YFDLKVGSTS EVITSVSNDS LVVQDVLSEK VPNFVMNCSM FLGSYAVGFT LLWRLTLVAL  300
PSVLLLIIPG FMYGRILIGL ARRIREQYTR PGAIAEQAIS SVRTVYSFVA ERSTMTQFSA  360
ALEESARLGL KQGLAKGIAV GSNGITFTIW AFNVWYGSRL VMYHGYQGGT VFAVSASIVV  420
GGLALGSGLS NVKYFSEASA AAERVQEVMR RVPKIDSESD AGEELANVAG EVEFKNVDDS  480
KLGNQEQLAP PLRVLASTVG GPLSFLINIG QHYNFGAMGE YLTKRVREQM LAKILTFEIG  540
WFDRDENSSG AICSQLAKDA NVVRSLVGDR MALVIQTVSA VVIAFTMGLD RILSLFDQAQ  600
DVPRKESIRQ SWFAGLGLGT STSLMTCTWA LDFWETEIDP DNPEGCRPEK LKGDCITWSE  660
RREQASLGPL RNRQRKIAER RQEHAGAARG ETRVTTGSKL VGDVPPRCRA REAMRGPTAA  720
GVGEARSRER MFWAFEGGPR RDGAVASVAR RGRFCAVDRI RGHPHPREMD KRPPQTAAKA  780
KSALRSFASV FAHADAVDVV VMVLGLVGAV GDGMSTPMVM FIGSRIFNDV GIGPNALPEF  840
TSMMNANVRY LLYLAAANWV LAFLVQYVPH VFVLRLTHHA EGYCWTRTAE RQASRMRARY  900
LKAMLRQDVE YFDVNKGSTS EAVTSVSNDS LLVQDALSEK LPNFILNCSL FLGSYVGGFV  960
LLWRLTLVAL PSALLLIVPG FFYGRTLIGL SRRIREQYTR PGTVAQQAVS SVRIVYSFVA  1020
EQSTMAKFSA LLDESVRLGL KQGLAKGFAI GSNGIRFAIA GFNIWYGSRL VMYHGSKGGT  1080
VFAISANLIM GATALGSALS NVKYLSEASS AAERIQEMIR RVPKIDSESE AGEELADVVA  1140
EVEFRNVEFS YPQTEIDPDN PEGFKPEMLK GECTELRRYL IIPLPARDDP TPRRETGRVV  1200
LCGGDGTAAL TRAREACAAL HRGVRSLKQA GPPRYAATPV ACGEKPANLG DAFEGISNTL  1260
SGARYLGTVG PAWTTQAKQD IICAGRRLII PFHLAYGRKE LGGATAPPPA RNVCPCVGSI  1320
GTALPRAHEA SSSSPTHHAR HHPSTTGGSR PDAFAKAAKR GEVSAGRGSS SAAPMAQRRQ  1380
RAAASMRCDA CMIAAHEANG GGGAGAHGAP DQSPSPHKPE RAGTPGEGRR RRQKKKKKKK  1440
REERKPRQGG WWTGGGGSVA GGWECAVRGG SANKQTFHLS PPHLPRQLLD SPAPRTAGFI  1500
GGEGMRRGGP VAAAGPEGDL VTRFRGVRKR PWGRYAAEIR DPAKKARVWL GTFDSAEDAA  1560
RAYDAAARTL RGPKARTNFP LPVAAHHHHQ RHAAYTAPYT AVAARPAISS MSSTVESFGG  1620
ARSRPALPTR PPPPPIPDAD CRSDCGSSAS VVDDDCADAA ASPSCRLPLA LDLNLPPGDC  1680
GFVCYGDEDE LRLTELRL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6qee_A6e-421321176341067ABCB1HM-EQ
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
114281439RRRRQKKKKKKK
214301438RRQKKKKKK
314301441RRQKKKKKKKRE
414301445RRQKKKKKKKREERKP
514341440KKKKKKR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025802041.10.0putative multidrug resistance protein
SwissprotQ6YUU50.0MDR_ORYSJ; Putative multidrug resistance protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.13e-20ethylene responsive element binding factor 3