PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00080.1.g00670.1.sm.mkhc

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bHLH

Protein Properties

Length: 191aa MW: 20655.5 Da PI: 9.2208

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00080.1.g00670.1.sm.mkhc	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.5	0.00027	164	189	2	27
HHHHHHHHHHHHHHHHHHHHHHHCTS CS HLH 2 rrahnerErrRRdriNsafeeLrell 27 + + erE+ Rd++N+ f eL ++l Zjn_sc00080.1.g00670.1.sm.mkhc 164 KNHKAEREKLKRDQLNDLFLELSSML 189 677899****************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence Send to blast
MDCCWPHHRM KPLFPSSRQK ARLPSAGNLG GPECDGPCVA ALVRGPPKCA GGWPPHARCV 60 FSPSSSPLPT SVAPPTFLTS AAAVSSPSYA YPHPRSAVVN RRRCQRRAPD VEICRSRGFS 120 DEKYLGMGVE TESSDSLPGC SIATADKPVS GLSDQRSQDK NPKKNHKAER EKLKRDQLND 180 LFLELSSMLA G

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP22282	4	4