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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Zjn_sc00076.1.g00760.1.am.mk |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
LBD |
| Protein Properties |
Length: 279aa MW: 29776.2 Da PI: 5.3351 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00076.1.g00760.1.am.mk | genome | ZGD | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 124.1 | 7.1e-39 | 26 | 126 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvi 80
+C aCk+lrrkCa+dC++ap+f ++q +++fa+vh++FGasnv kll+ lp ++r++a+ ++++eA+ar+rdPvyG+v++i
Zjn_sc00076.1.g00760.1.am.mk 26 PCGACKFLRRKCASDCIFAPHFDQDQgAAQFAAVHRVFGASNVAKLLNYLPIDKRTEAVITICFEAQARLRDPVYGCVSHI 106
7*************************89***************************************************** PP
DUF260 81 lklqqqleqlkaelallkee 100
++lqqq+ +l++el++++++
Zjn_sc00076.1.g00760.1.am.mk 107 FSLQQQIVNLQSELNYVQNH 126
****************9987 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 279 aa
Download sequence Send
to blast |
MSSSVAGGAG GCGGAGGGSG GGGGGPCGAC KFLRRKCASD CIFAPHFDQD QGAAQFAAVH 60
RVFGASNVAK LLNYLPIDKR TEAVITICFE AQARLRDPVY GCVSHIFSLQ QQIVNLQSEL 120
NYVQNHLAAM EQQQQVLSPA QPLIPMTGAF TELQPASNIQ ANVDKSYLLP TEQQQQYVQM 180
GESSRGAGGS GGTDDLYELA RGLLNRHGRV DGSEEPPQPK HQMWPINEED DEDDDDDDVL 240
RSGSFVVGRG CKGANLLLNK MPGSQLQRRN EASGRVLAR
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