PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00075.1.g00940.1.am.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 304aa    MW: 32259.8 Da    PI: 6.1684
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00075.1.g00940.1.am.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.33.6e-24108169159
                                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                     ldDg++WrKYGqKe+++s++p++Y+rCt++   +C ++++v+r++e p++  +tY g H+++
  Zjn_sc00075.1.g00940.1.am.mkhc 108 LDDGHAWRKYGQKEIQNSKHPKAYFRCTHKfdqQCLAQRQVQRCDEAPETYRVTYIGAHTCR 169
                                     59***************************9999**************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.1E-2594171IPR003657WRKY domain
SuperFamilySSF1182907.19E-24103171IPR003657WRKY domain
PROSITE profilePS5081119.52103171IPR003657WRKY domain
SMARTSM007742.0E-34108170IPR003657WRKY domain
PfamPF031061.6E-22109169IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009862Biological Processsystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MAAAPYEQVM EDMLRGRDFA AQLQGLLRDS PKAGLIVDQI LNAFSRAIDA AKAMATEEGS  60
EVQSDVTCAG GGGGKRKAAA GGSGGDRGRA SRRRTQTASV KTVTTKDLDD GHAWRKYGQK  120
EIQNSKHPKA YFRCTHKFDQ QCLAQRQVQR CDEAPETYRV TYIGAHTCRD PATVARVVLH  180
HAGAEASALP AGSRLISFAP NGSTPATSTT TTTTTGNANQ QADHPEGAVL LRPGSGLPPL  240
KVEGVDQEEV LSSLTPAGSA RNPVATPGPD QGDVTSDLQF FGDGIGEIFT MDDGTFDLED  300
IFRI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A6e-37102169269OsWRKY45
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00408DAPTransfer from AT3G56400Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004962450.11e-114probable WRKY transcription factor 70
TrEMBLA0A0A9VCV71e-119A0A0A9VCV7_ARUDO; Uncharacterized protein
STRINGSi022702m1e-113(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76563549
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.14e-26WRKY DNA-binding protein 46