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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00070.1.g00100.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 136aa MW: 15582.5 Da PI: 5.9826 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 50.1 | 8.9e-16 | 12 | 136 | 2 | 125 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeek.ewyfFskrdkkyatgkrknratks 80 ppG+ F+Ptd+el+++yL ++ gk+ +l+++ +++ ++ +++P++L +++ +++ ++f+++ ++ r+ + Zjn_sc00070.1.g00100.1.am.mk 12 PPGLIFDPTDKELIWHYLLPQSLGKPETLSSFvVEDNKVANTQPRKLFQNHGLSDNlPTFFYVRDERPD--ACRNCLCDGD 90 8*************************88877658888**********7555555553667777777654..568888899* PP NAM 81 gyWkatgk....dkevlsk.kgelvglkktLvfykgrapkgektdWvmhe 125 g Wk + d +vl ++++ ++++ L f + + +Wvmhe Zjn_sc00070.1.g00100.1.am.mk 91 GLWKIQKCeskdDPHVLIVgGTNVRWTRNNLNFNLD---S-GSFSWVMHE 136 ****5543111133444445777899*******832...3.3679****8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.96E-19 | 7 | 136 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 18.03 | 11 | 136 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.3E-12 | 12 | 136 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence Send to blast |
MSAAKFFSDN HPPGLIFDPT DKELIWHYLL PQSLGKPETL SSFVVEDNKV ANTQPRKLFQ 60 NHGLSDNLPT FFYVRDERPD ACRNCLCDGD GLWKIQKCES KDDPHVLIVG GTNVRWTRNN 120 LNFNLDSGSF SWVMHE |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP8717 | 9 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G29035.1 | 2e-07 | NAC domain containing protein 3 |