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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zjn_sc00068.1.g00950.1.sm.mkhc |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
NAC |
| Protein Properties |
Length: 305aa MW: 34434.9 Da PI: 7.8736 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00068.1.g00950.1.sm.mkhc | genome | ZGD | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 160.6 | 5.9e-50 | 19 | 151 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee..vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatg 71
lppGfrFhP+d+elv +yL+kk+++ + ++ +vd++k+ePwdLp + kewyf+s rd+kyatg
Zjn_sc00068.1.g00950.1.sm.mkhc 19 LPPGFRFHPRDDELVLDYLAKKLHSGGggsvvsI--YGcpTMVDVDLNKCEPWDLPDIACIVGKEWYFYSLRDRKYATG 95
79*********************99987776432..2233699*************64445679*************** PP
NAM 72 krknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+r+nrat+sgyWkatgkd+ + + +g lvg++ktLvfykgrapkg+kt+Wvmhe+r
Zjn_sc00068.1.g00950.1.sm.mkhc 96 QRTNRATESGYWKATGKDRLISR-NGLLVGMRKTLVFYKGRAPKGKKTEWVMHEFRT 151
*********************99.999****************************96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 305 aa
Download sequence Send
to blast |
MGSRAMAVMN SLSMVEATLP PGFRFHPRDD ELVLDYLAKK LHSGGGGSVV SIYGCPTMVD 60
VDLNKCEPWD LPDIACIVGK EWYFYSLRDR KYATGQRTNR ATESGYWKAT GKDRLISRNG 120
LLVGMRKTLV FYKGRAPKGK KTEWVMHEFR TEGQGDPTKL PFKEDWVLCR VFYKSRATIA 180
KPHTENSSYN NVDTATTSPP PLVDNYNISF DQPGSVQNIE GYEQVPCFSS NPSQPSSSMN 240
VPRSSSMAAD QKQHMEKSIT DMLMSQFSRF EGNVIKREAP QSNFLQDGFE YLAESGFTEM 300
WNSFN
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 9e-48 | 6 | 174 | 4 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 9e-48 | 6 | 174 | 4 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 9e-48 | 6 | 174 | 4 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 9e-48 | 6 | 174 | 4 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-47 | 6 | 174 | 7 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 1e-47 | 6 | 174 | 7 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 1e-47 | 6 | 174 | 7 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 1e-47 | 6 | 174 | 7 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 1e-47 | 6 | 174 | 7 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 1e-47 | 6 | 174 | 7 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 1e-47 | 6 | 174 | 7 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 1e-47 | 6 | 174 | 7 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 9e-48 | 6 | 174 | 4 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 9e-48 | 6 | 174 | 4 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that mediates auxin signaling to promote lateral root development. Activates the expression of two downstream auxin-responsive genes, DBP and AIR3. {ECO:0000269|PubMed:11114891}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced by auxin. |
| Publications
? help Back to Top |
- Le Hénanff G, et al.
Grapevine NAC1 transcription factor as a convergent node in developmental processes, abiotic stresses, and necrotrophic/biotrophic pathogen tolerance.
J. Exp. Bot., 2013. 64(16): p. 4877-93
[PMID:24043850] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Xiao D, et al.
SENESCENCE-SUPPRESSED PROTEIN PHOSPHATASE Directly Interacts with the Cytoplasmic Domain of SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE and Negatively Regulates Leaf Senescence in Arabidopsis.
Plant Physiol., 2015. 169(2): p. 1275-91
[PMID:26304848] - Huo X,Wang C,Teng Y,Liu X
Identification of miRNAs associated with dark-induced senescence in Arabidopsis.
BMC Plant Biol., 2015. 15: p. 266
[PMID:26530097] - Chen X, et al.
Auxin-Independent NAC Pathway Acts in Response to Explant-Specific Wounding and Promotes Root Tip Emergence during de Novo Root Organogenesis in Arabidopsis.
Plant Physiol., 2016. 170(4): p. 2136-45
[PMID:26850273] - Liu C,Wang B,Li Z,Peng Z,Zhang J
TsNAC1 Is a Key Transcription Factor in Abiotic Stress Resistance and Growth.
Plant Physiol., 2018. 176(1): p. 742-756
[PMID:29122985]
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