 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zjn_sc00067.1.g00110.1.sm.mkhc |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
WRKY |
| Protein Properties |
Length: 226aa MW: 25187.8 Da PI: 9.0972 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00067.1.g00110.1.sm.mkhc | genome | ZGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 69.4 | 5.3e-22 | 44 | 105 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59
dDg++WrKYG K+ +s fpr YYrCt++ +C ++k+v+++ ++dp ++ +tY ++H+++
Zjn_sc00067.1.g00110.1.sm.mkhc 44 DDGHQWRKYGEKKLSNSSFPRFYYRCTYKnemKCAATKQVQQKdTSDPPLFSVTYFNHHTCS 105
8***************************99999*******876157**************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 226 aa
Download sequence Send
to blast |
MALESVPLYP GGDLASSRAT SRAHQQRIRK DERSWTTDTY APYDDGHQWR KYGEKKLSNS 60
SFPRFYYRCT YKNEMKCAAT KQVQQKDTSD PPLFSVTYFN HHTCSTSSGP MGRGSYTRDA 120
TVQSSSLSIC FSSHSSSEQP TFLTSAITPA SPNTQSYRAN QQLDRSAYAG RQFQWPGTSS 180
PGSNGLLKME IDNFSEASAS SSSSGVLSRT LLPIGQSRCI EYFHFL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KU058629 | 5e-81 | KU058629.1 UNVERIFIED: Panicum miliaceum WRKY20-like gene, complete sequence. |
