PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00065.1.g02010.1.sm.mkhc | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 313aa MW: 33470.8 Da PI: 10.5016 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 30.1 | 1e-09 | 282 | 300 | 3 | 21 |
-SS-EEEEEEE--TT-SS- CS WRKY 3 DgynWrKYGqKevkgsefp 21 D+y+WrKYGqK++kgs++p Zjn_sc00065.1.g02010.1.sm.mkhc 282 DEYSWRKYGQKPIKGSPHP 300 9****************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF10533 | 9.1E-18 | 232 | 278 | IPR018872 | Zn-cluster domain |
Gene3D | G3DSA:2.20.25.80 | 3.2E-9 | 268 | 300 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 11.176 | 275 | 300 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.36E-7 | 278 | 301 | IPR003657 | WRKY domain |
SMART | SM00774 | 9.6E-4 | 280 | 311 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.0E-6 | 282 | 300 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence Send to blast |
MEEVEEANRA AVESCHRVLA LLAQPQDPAQ LRSVAKGTDE ACAKFRKVVS LLSNGGVGEA 60 ETSGGSGSHP KAKIASRRHN PGFFTQKSFL DSNTPVVVLN SAQPSPSSAQ VYPRNGALDA 120 QSVNPLGGPP KMVQPLSAHF QFGNVSSRYH FHNQQQQKQK LQTEMFKRSN SGINLKFDSA 180 SGTGTMSSAR SSFLSSLSMD GSVASLDGKS STFHLIGGPA MSDPVNAQQA PRRRCTGHGE 240 DGTGKCAVTG RCHCSKRSRK LRVKRSIKVP AISNKIADIP PDEYSWRKYG QKPIKGSPHP 300 SPASIHVTCP ALL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025795417.1 | 0.0 | protein WRKY1-like isoform X1 | ||||
TrEMBL | A0A2S3IK15 | 0.0 | A0A2S3IK15_9POAL; Uncharacterized protein | ||||
TrEMBL | A0A2T7C3I7 | 0.0 | A0A2T7C3I7_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Ia01239.1.p | 0.0 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2859 | 38 | 87 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28650.1 | 6e-32 | WRKY DNA-binding protein 74 |