PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00060.1.g01560.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 384aa    MW: 41841.8 Da    PI: 4.898
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00060.1.g01560.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM45.13.2e-14121475128
                           NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvka..eekewyfFskrdkkya.tgk 72 
                                   f F P+d  lv + L++k+ g +++ +  + + d+++v P++L +          +  +  + ++ yfFs+++  ++ t+k
  Zjn_sc00060.1.g01560.1.am.mk  12 FMFTPSDRRLV-DILRAKIGGGDFPNAAYFVDNDVCSVRPEELVRkhskparvrsR--EagDGQQFYFFSPESFVSTrTKK 89 
                                   89*********.88*********999888**************7336777755432..13255577999988766552233 PP

                           NAM  73 rknra....tksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                                   +++r+      +  W+  g+ k v     ++ g  + + f+ k   ++  k  W+m ey+l
  Zjn_sc00060.1.g01560.1.am.mk  90 QRKRTidrtSGNECWHGEGSGKLVDG---TNDGYMTKFSFHiKIAGETVAKPGWLMTEYSL 147
                                   33333332233567*****9877754...567888889999444667777*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.2458163IPR003441NAC domain
PfamPF023652.7E-1012147IPR003441NAC domain
SuperFamilySSF1019416.54E-2012163IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    Send to blast
MAAFPAAEDD SFMFTPSDRR LVDILRAKIG GGDFPNAAYF VDNDVCSVRP EELVRKHSKP  60
ARVRSREAGD GQQFYFFSPE SFVSTRTKKQ RKRTIDRTSG NECWHGEGSG KLVDGTNDGY  120
MTKFSFHIKI AGETVAKPGW LMTEYSLKGT GAGGWVLCKI YKSPRGPGRS KVPFSLENKR  180
KAADDLEDAR PSTKERRQDQ IDANGALEGD LPLPSDDLPS VNPAVQTVYG ALTDGEVINA  240
LASGVTVDEL IPSTTEDRQP EPHVLPASFD ALMHMMHCPL GVWEVPNGMR TEAFEAYRGL  300
FGSTYDVVNA QNNATVQTGP GALTDGGVVA AHASGATIDE LIPSTTDERQ PESQVLLEDD  360
GMPFQVPEVV DTHTHFMGLI FGKN
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62801545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.27e-07NAC family protein