 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zjn_sc00055.1.g00650.1.sm.mkhc |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
NAC |
| Protein Properties |
Length: 255aa MW: 27824.2 Da PI: 9.0305 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00055.1.g00650.1.sm.mkhc | genome | ZGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 145.4 | 3.1e-45 | 11 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL.pkkvkaeekewyfFskrdkkyatgkrknrat 78
lppGfrF+Ptdeel+v+yL++++ +++l+++ i++++i+ ++P+dL p +e e yfF++++ ky +g+r+nrat
Zjn_sc00055.1.g00650.1.sm.mkhc 11 LPPGFRFRPTDEELIVHYLRRRAFASPLPAAVDIPDIRILAHDPSDLlP--PGWNEPERYFFTCKEAKYVKGRRANRAT 87
79***************************9666**************43..3446789********************* PP
NAM 79 ksgyWkatgkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
+gyWkatgk+k+v ++ + lvg+k++Lvfy+gr p+g+ktdWvmheyrl
Zjn_sc00055.1.g00650.1.sm.mkhc 88 GAGYWKATGKEKPVAVAapggnQAVLVGMKRSLVFYRGRPPSGSKTDWVMHEYRL 142
**************999897655666***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 255 aa
Download sequence Send
to blast |
MDAKEVVRRR LPPGFRFRPT DEELIVHYLR RRAFASPLPA AVDIPDIRIL AHDPSDLLPP 60
GWNEPERYFF TCKEAKYVKG RRANRATGAG YWKATGKEKP VAVAAPGGNQ AVLVGMKRSL 120
VFYRGRPPSG SKTDWVMHEY RLAGAGLAPC RRAQAGEASR ADEGWVLCRV FRKRGSSASD 180
GTAPAEADAD AERGAEEEGE GDDAAPASGF IDFFARADRQ RRRRASSPVV TVSSSCLTDA 240
SHECRDQDTT SGGCA
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-37 | 6 | 177 | 12 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-37 | 6 | 177 | 12 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-37 | 6 | 177 | 12 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-37 | 6 | 177 | 12 | 169 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 1e-37 | 6 | 177 | 12 | 169 | NAC domain-containing protein 19 |
| 4dul_B | 1e-37 | 6 | 177 | 12 | 169 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional repressor that negatively regulates the expression of genes involved in xylem vessel formation. Represses the transcriptional activation activity of NAC030/VND7, which regulates protoxylem vessel differentiation by promoting immature xylem vessel-specific genes expression (PubMed:20388856). Transcriptional activator that regulates the COLD-REGULATED (COR15A and COR15B) and RESPONSIVE TO DEHYDRATION (LTI78/RD29A and LTI65/RD29B) genes by binding directly to their promoters. Mediates signaling crosstalk between salt stress response and leaf aging process (PubMed:21673078). May play a role in DNA replication of mungbean yellow mosaic virus (PubMed:24442717). {ECO:0000269|PubMed:20388856, ECO:0000269|PubMed:21673078, ECO:0000269|PubMed:24442717}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By abscisic acid (ABA) and salt stress. {ECO:0000269|PubMed:21673078}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | FP091915 | 1e-108 | FP091915.1 Phyllostachys edulis cDNA clone: bphyem115l12, full insert sequence. |
| GenBank | FP099185 | 1e-108 | FP099185.1 Phyllostachys edulis cDNA clone: bphyem106m22, full insert sequence. |
