PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00054.1.g00110.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 207aa    MW: 22494.3 Da    PI: 6.1413
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00054.1.g00110.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM38.34.1e-121560147
                           NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL 47
                                  lppG++F Ptd+e+vv+yL+ ++ +++l+  +vi++ di++++P dL
  Zjn_sc00054.1.g00110.1.sm.mk 15 LPPGYKFYPTDQEIVVCYLRCRAVNQPLPS-TVIADKDILDHHPADL 60
                                  79**************************99.89*************9 PP
2NAM31.84.2e-106390101128
                           NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
                                   g+k tLvfy+g++ +ge tdWvm+eyrl
  Zjn_sc00054.1.g00110.1.sm.mk  63 GMKSTLVFYNGKQTSGEPTDWVMQEYRL 90 
                                   8*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.11E-2510100IPR003441NAC domain
PROSITE profilePS5100512.55715158IPR003441NAC domain
PfamPF023656.0E-101690IPR003441NAC domain
SuperFamilySSF1019418.11E-25146156IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MASYFPLASG SAVPLPPGYK FYPTDQEIVV CYLRCRAVNQ PLPSTVIADK DILDHHPADL  60
VPGMKSTLVF YNGKQTSGEP TDWVMQEYRL SGDGLSPYHV TIPCMNNNSG ESSGSVEVTN  120
KEHDDPALTP SVKGPSIENA NIVLNPDSSW VVCHIHKKRA RNTPVTIRTN NGVDGKIPFF  180
DFLGLGNPDG GTACSNVLHV EKKNSEL
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3499934
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.28e-16NAC domain containing protein 41