PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00050.1.g02440.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 289aa MW: 30528.7 Da PI: 4.0109

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00050.1.g02440.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	27.8	5.2e-09	64	95	28	59
-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 28 tsagCpvkkkversaedpkvveitYegeHnhe 59 t ++C+++k+ve+++ dp +++ tY+geH h+ Zjn_sc00050.1.g02440.1.am.mk 64 TDKDCKARKQVECCRADPGTLILTYTGEHSHP 95 6679***************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50811	14.32	29	97	IPR003657	WRKY domain
SMART	SM00774	1.8E-4	34	96	IPR003657	WRKY domain
Pfam	PF03106	5.4E-6	65	95	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	2.6E-8	65	97	IPR003657	WRKY domain
SuperFamily	SSF118290	3.79E-7	66	97	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence Send to blast
MEGDLGWCGA GSSNNWDLHA VVRFACGDTS VPPSDDAFPW PGPLQPLLTD SAVDDPSRRP 60 QPSTDKDCKA RKQVECCRAD PGTLILTYTG EHSHPVPLYR NSLAGTTRSK PQQQQLSPST 120 PLRSPSVSFE YKDEEDDDTL AVRLLLEDTE MAAEDDTLQF FQPDELARPG FSGSGVGCDD 180 VMLFPKPEEP APASGNYSGA CADAMLFPNN KPDGPVGPPG PVITGGTEDI MLFQFQNPVE 240 PQPSPASASV ANGSAGTASL INFVDEKFSI SGLSAWEAAA AAAASGWGL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025812935.1	3e-48	WRKY transcription factor 22-like
TrEMBL	A0A3L6PD89	2e-49	A0A3L6PD89_PANMI; WRKY transcription factor 22-like
STRING	Pavir.Da00956.1.p	9e-42	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP12562	25	36

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01250.1	1e-14	WRKY family protein