 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zjn_sc00049.1.g04360.1.am.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
bHLH |
| Protein Properties |
Length: 206aa MW: 22358.4 Da PI: 10.8423 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00049.1.g04360.1.am.mk | genome | ZGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 24 | 7e-08 | 134 | 173 | 15 | 54 |
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
+iN+ +++L++llP+a + ++ s L++++ YIksL
Zjn_sc00049.1.g04360.1.am.mk 134 EINELISRLQTLLPSARRRGGNQASTTKLLKETCSYIKSL 173
7**************86667777****************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 206 aa
Download sequence Send
to blast |
MADKTREIGD PAPGKGDRSI LWGSGTRQVE GEVGTQPQLI TRPRTAGARG HPRLRAGEGH 60
LDPTDPNFIC RSVQAAAAPC VSVLAAPPCR VSRAPAAASQ LHRCSISWRL LRRASPTTTT 120
MSSRRSRGGV SEEEINELIS RLQTLLPSAR RRGGNQASTT KLLKETCSYI KSLHREVDDL 180
SDRLSDLMAT MDQNSPGAEI IRSLLR
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EU958159 | 2e-89 | EU958159.1 Zea mays clone 1675661 DNA binding protein mRNA, complete cds. |
