PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00049.1.g03550.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 230aa    MW: 23855.4 Da    PI: 4.0865
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00049.1.g03550.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.82.1e-162775355
                           AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  ykGVr ++ +g+Wv+e+r p   g+++r++lg++ tae Aa+a++aa ++l+g
  Zjn_sc00049.1.g03550.1.sm.mk 27 YKGVRMRS-WGSWVSEVRAP---GQKTRIWLGSHSTAEAAARAYDAALLCLKG 75
                                  9****998.*******9998...557************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103220.6662685IPR001471AP2/ERF domain
SMARTSM003804.7E-282691IPR001471AP2/ERF domain
SuperFamilySSF541712.55E-162686IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.6E-262685IPR001471AP2/ERF domain
PRINTSPR003672.9E-82738IPR001471AP2/ERF domain
PfamPF008473.9E-102775IPR001471AP2/ERF domain
CDDcd000184.02E-142786No hitNo description
PRINTSPR003672.9E-84965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MVKTAASDDT AGAAKTQHGG GGGKRTYKGV RMRSWGSWVS EVRAPGQKTR IWLGSHSTAE  60
AAARAYDAAL LCLKGSAAAA DLNFPVRLPF DLPAAAMSPK EIQRVAAAAA AGNACGDRAF  120
GACTGTDDVD DGSAVSGDSA SAVSSPESTV TSETEPEPEA ACCHGDVLDY GLLADIDAFF  180
PSPECMEYAM MDPCSAFFAP APMAAMSDDD VYWEDQEGDI ALWSFSTLDC
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3708703e-82AK370870.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2118P17.
GenBankAK3761003e-82AK376100.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3114M17.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004964908.12e-80ethylene-responsive transcription factor ERF014
TrEMBLK3Y1B34e-79K3Y1B3_SETIT; Uncharacterized protein
STRINGSi007977m7e-80(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31973469
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G44830.12e-20ERF family protein