 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zjn_sc00045.1.g03990.1.am.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 249aa MW: 27234.7 Da PI: 9.455 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00045.1.g03990.1.am.mk | genome | ZGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.2 | 5.7e-18 | 137 | 191 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++t+ q Le+ F+ ++ +s++++ +LA+++gL+ rqV vWFqNrRa+ k
Zjn_sc00045.1.g03990.1.am.mk 137 RKKLRLTSAQASLLEDSFRAHNILSHTQKHDLARRVGLSARQVEVWFQNRRARTK 191
788899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 114.5 | 6.5e-37 | 137 | 226 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLe 81
+kk+rl++ q++lLE+sF++++ L++++K++lar++gl++rqv+vWFqnrRARtk+kq+E+d+e L+r++d+l++en+rL+
Zjn_sc00045.1.g03990.1.am.mk 137 RKKLRLTSAQASLLEDSFRAHNILSHTQKHDLARRVGLSARQVEVWFQNRRARTKLKQTEVDCELLRRWCDSLTDENARLR 217
69******************************************************************************* PP
HD-ZIP_I/II 82 keveeLree 90
++ +eLr++
Zjn_sc00045.1.g03990.1.am.mk 218 RDLAELRAA 226
******975 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 249 aa
Download sequence Send
to blast |
MPAFPSTLLL IETSQPAPAH PVHQQSTSLT TAGSSMEDCS AEYDTRLTLE TSRPLPPQGQ 60
ATVRLFGELI SPQDYGRGRA DRLEPTAPAA GRKKRADCGG VETATGGAGG RQNKRAIRTL 120
QVEDDGDRRS QSDGGSRKKL RLTSAQASLL EDSFRAHNIL SHTQKHDLAR RVGLSARQVE 180
VWFQNRRART KLKQTEVDCE LLRRWCDSLT DENARLRRDL AELRAAAAVS VVCPSCCNKK 240
MAVVAGDMA
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 135 | 141 | SRKKLRL |
| 2 | 185 | 193 | RRARTKLKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
