PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00045.1.g01980.1.sm.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 143aa MW: 16037 Da PI: 9.2466

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00045.1.g01980.1.sm.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37.2	6.3e-12	60	105	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++ rr+++NRe+ArrsR RK+ ++ eL+ v+eL N++L el+ Zjn_sc00045.1.g01980.1.sm.mk 60 RKRRRLASNRESARRSRVRKQRRLGELAAQVAELRDANQRLLVELN 105 678999***********************************98886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.1E-10	56	120	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.484	58	105	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.5E-8	60	132	No hit	No description
Pfam	PF00170	1.4E-8	60	105	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.83E-9	60	108	No hit	No description
PROSITE pattern	PS00036	0	63	78	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence Send to blast
MEHSFVGVGA TLACLQSSFD FASSFLLQDD PPDIYGFSSP DTVGPYPAVD SRARRSTDER 60 KRRRLASNRE SARRSRVRKQ RRLGELAAQV AELRDANQRL LVELNLAIAK HARVVRENDE 120 LREEARGLRE RLGGMEVEGD AVA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	59	63	RKRRR
2	60	64	KRRRL
3	72	78	RRSRVRK
4	72	79	RRSRVRKQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_014660928.1	1e-34	basic leucine zipper 8
TrEMBL	K3YXV1	2e-33	K3YXV1_SETIT; Uncharacterized protein
STRING	Si019099m	4e-34	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP12742	27	35