PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00045.1.g01640.1.sm.mkhc | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 245aa MW: 27189.6 Da PI: 7.6594 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32 | 2.7e-10 | 62 | 112 | 2 | 52 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 +++k+ r+ +NR +A +sR+RK+ +++ Le+k+k Leae +L +l+ Zjn_sc00045.1.g01640.1.sm.mkhc 62 PDSKKKLRRVRNRDSAMKSRERKRLYLKDLETKSKYLEAECCRLSYTLQCC 112 689*************************************99998777655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.1E-14 | 59 | 124 | No hit | No description |
SMART | SM00338 | 4.6E-4 | 61 | 125 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.496 | 63 | 121 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.5E-8 | 64 | 119 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.31E-10 | 65 | 123 | No hit | No description |
CDD | cd14704 | 3.69E-14 | 66 | 117 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 69 | 83 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence Send to blast |
MDDTNEAAVD ATGVGIDEFL DAILIGDGES NGVPDPTGEG SVGGLSVGED EEVMGVDGDD 60 DPDSKKKLRR VRNRDSAMKS RERKRLYLKD LETKSKYLEA ECCRLSYTLQ CCSAENMALR 120 QCLLKDRLIG APTAMQESAV LMETLPLVSL MWLVCIAHLF LIPGVTNRSL LAPSGPVRDP 180 VKLGRMVTNT VKMIRMTTNC VNMNSDARGA LELFRHGRCY KGRKARMKFP WLPWQQLLPR 240 LSVIL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in endoplasmic reticulum (ER) stress response (PubMed:21223397, PubMed:22050533, PubMed:22199238). Acts downstream of the ER stress sensors IRE1, BZIP39 and BZIP60 to activate BiP chaperone genes (PubMed:22050533, PubMed:22199238). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533, ECO:0000269|PubMed:22199238}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By dithiothreitol-induced endoplasmic reticulum (ER) stress response (PubMed:22050533, PubMed:21223397). Induced by salt stress (PubMed:22050533). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002453468.1 | 7e-89 | bZIP transcription factor 50 | ||||
Refseq | XP_025803229.1 | 9e-89 | bZIP transcription factor 50-like | ||||
Swissprot | Q69XV0 | 8e-60 | BZP50_ORYSJ; bZIP transcription factor 50 | ||||
TrEMBL | A0A2T7F313 | 1e-87 | A0A2T7F313_9POAL; Uncharacterized protein | ||||
STRING | Pavir.J35667.1.p | 5e-92 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6934 | 37 | 50 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G42990.1 | 6e-13 | basic region/leucine zipper motif 60 |
Publications ? help Back to Top | |||
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