PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00045.1.g00320.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bHLH

Protein Properties

Length: 255aa MW: 27619 Da PI: 10.4624

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00045.1.g00320.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	21.3	4.8e-07	46	98	6	53
HHHHHHHHHHHHHHHHHHHCTSCC.C.......TTS-STCHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.as....kapskKlsKaeiLekAveYIks 53 + +Er+RR+++N +++L +l+ +++s+ + + Le A +YI++ Zjn_sc00045.1.g00320.1.am.mk 46 KTVERNRRNQMNALYSRLDTLVRDgGApeaeRGGSPATTRPDRLETAAHYIRQ 98 679*****************886447888999999************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	1.6E-6	45	115	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	2.3E-7	45	115	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence Send to blast
MVYYYPTRKR TPTPVSWPEM ATQPPPPPPF GNPAAGGGGG FKPDRKTVER NRRNQMNALY 60 SRLDTLVRDG GAPEAERGGS PATTRPDRLE TAAHYIRQTA ERVERLRERK RELTSASSTQ 120 LGSGSSARAA EVEVQHLGSG LHAILVTGAP PSDGTSFHRA VRAVEEAGGE VQNAHFSVVG 180 ARAIYTIHTL VTAQQGGIER VVQRLRGALL QTLCARRMQS WKLESNALAD GRSTRTVLKA 240 STYATHLLSD ADGLD

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004954617.2	3e-78	transcription factor bHLH162
TrEMBL	A0A1E5VEJ3	4e-77	A0A1E5VEJ3_9POAL; Uncharacterized protein
STRING	Si020234m	1e-77	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP11987	29	38

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G20970.1	7e-12	bHLH family protein