PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00044.1.g04720.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 385aa MW: 41004.9 Da PI: 8.2835

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00044.1.g04720.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.3	5.1e-11	229	274	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr++r + NR +A rs +RK +i eLe+kv++L++e ++L +l Zjn_sc00044.1.g04720.1.am.mk 229 KRAKRIIANRQSAARSKERKARYITELERKVQTLQTEATTLSAQLT 274 9****************************************98765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	9.7E-9	225	291	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.599	227	277	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.5E-9	229	273	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	6.91E-10	229	276	No hit	No description
Gene3D	G3DSA:1.20.5.170	5.7E-10	229	277	No hit	No description
CDD	cd14703	8.26E-25	230	277	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence Send to blast
MSSPIDTGPR SSRPPVGGHM QVGVAPITSM GPTYPPPPSF SDPAQNRTRH TPLSSSSPQC 60 SAMAMPPKPG DPPQRSPGRS PNLNLPCPLP PIPGGTPQQQ PSGSGPPLPR AVHHRRARSE 120 VAFRFPDDLG GGGGGSFDDG GSEDDLFSTF MDMDKIAGAD RDRAAETSSP PRPAKHRHSA 180 SFDGFGMGGG GEGPGLQQDG AGGVFGEVME AKKAMSSEQL AELAAIDPKR AKRIIANRQS 240 AARSKERKAR YITELERKVQ TLQTEATTLS AQLTLFQLSE QQAVQHHGNI QLPPHFQPPP 300 NVPTHQMLSL PDMMQQDSLG RFQGLDIGKG PVAVKSEAEV VVKSEGSSIS AGRIQSIYVS 360 SAPPGTANVN HHYYVYWDQV ISFHM

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence Send to blast

MSSPIDTGPR SSRPPVGGHM QVGVAPITSM GPTYPPPPSF SDPAQNRTRH TPLSSSSPQC  60
SAMAMPPKPG DPPQRSPGRS PNLNLPCPLP PIPGGTPQQQ PSGSGPPLPR AVHHRRARSE  120
VAFRFPDDLG GGGGGSFDDG GSEDDLFSTF MDMDKIAGAD RDRAAETSSP PRPAKHRHSA  180
SFDGFGMGGG GEGPGLQQDG AGGVFGEVME AKKAMSSEQL AELAAIDPKR AKRIIANRQS  240
AARSKERKAR YITELERKVQ TLQTEATTLS AQLTLFQLSE QQAVQHHGNI QLPPHFQPPP  300
NVPTHQMLSL PDMMQQDSLG RFQGLDIGKG PVAVKSEAEV VVKSEGSSIS AGRIQSIYVS  360
SAPPGTANVN HHYYVYWDQV ISFHM

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025799971.1	1e-134	transcription factor RF2b-like
TrEMBL	A0A2S3H5C0	1e-133	A0A2S3H5C0_9POAL; Uncharacterized protein
TrEMBL	A0A2T7F053	1e-133	A0A2T7F053_9POAL; Uncharacterized protein
STRING	Pavir.Bb03755.1.p	1e-132	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2683	36	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40620.1	9e-34	bZIP family protein