PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00040.1.g03620.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 675aa    MW: 72678.9 Da    PI: 6.4167
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00040.1.g03620.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY66.54.1e-21169230259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-S..SSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversa..edpkvveitYegeHnhe 59 
                                   +Dg+ WrKYGqKe++g  +pr YYrC+++  gC+++++v+r++  e+p + ei Y g+H+++
  Zjn_sc00040.1.g03620.1.am.mk 169 EDGFIWRKYGQKEINGRMHPRLYYRCAYRhqGCTATRRVQRTReeEEPAAYEIAYYGQHTCR 230
                                   7**************************9988*********97611568899********995 PP
2WRKY61.81.2e-19498558359
                                   -SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTT..EEEEEEES--SS- CS
                          WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpk..vveitYegeHnhe 59 
                                   Dg+ WrKYGqKe++g ++pr Y+rC+++  gC+++++v+r++e+++  + ei Y g+H+++
  Zjn_sc00040.1.g03620.1.am.mk 498 DGFIWRKYGQKEINGRKHPRLYHRCAYShrGCTATRRVQRTHEEEQppAYEIAYYGHHTCS 558
                                   9************************98877**********9977553389*********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-22163230IPR003657WRKY domain
PROSITE profilePS5081117.282163230IPR003657WRKY domain
SuperFamilySSF1182901.57E-20164230IPR003657WRKY domain
SMARTSM007746.7E-28168231IPR003657WRKY domain
PfamPF031064.8E-23169230IPR003657WRKY domain
SuperFamilySSF1182901.31E-18491558IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.6E-20491558IPR003657WRKY domain
SMARTSM007741.7E-23496559IPR003657WRKY domain
PfamPF031063.0E-21498557IPR003657WRKY domain
PROSITE profilePS5081116.226498558IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 675 aa     Download sequence    Send to blast
MRGTSPDSDG IDRIKGPGTL VPIDRPRRLA NNQATREEPP PHLKPASEQS HAQPSAAVVP  60
SRGRSMPLAT PEAVVLELMT TGQQSVAHLG DLFRSACPAS THQELAAEIL RCCGRVIAAL  120
TSDGGKKRKA VEHDNTAAAA AWSPPSTPPR KRARVGAEAL GLVKSGTTED GFIWRKYGQK  180
EINGRMHPRL YYRCAYRHQG CTATRRVQRT REEEEPAAYE IAYYGQHTCR GAAASRQLPP  240
AVVDFGSSAW GCGTAPAASE QHLRSCWDDG EMSSPASEAA RFDEAQTVHE WRDAAAAPVE  300
VPSATLFHAF DPEMEFLDGG FDWESLINDW AGTNDKQGRP GAAGRFASLS GPTPINTPGV  360
WAHLAASDPA VSFKLAVLPA ETTETNKATS EPPLWVMAPP SNAHAVVLEQ MTMGQESAAH  420
LVYLLPASPH QELAAEILRC CGRVIAAIRA GGGGEKRKAV EHEDAAATTA VATCFPPRKR  480
SRGAEAPIRV VTSGTTVDGF IWRKYGQKEI NGRKHPRLYH RCAYSHRGCT ATRRVQRTHE  540
EEQPPAYEIA YYGHHTCSGA GASSAPAPPP YVVDSGSNAW VSVGGLAPPS EHHQLLSWDG  600
EMSSASSAET GFEAEAQTVH EWHDTARTEE PSATALPYAP DPVTEFLDGS FDWASVLDDD  660
PFDFGSALQH VATLQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-16169557969OsWRKY45
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025817680.17e-89probable WRKY transcription factor 66
TrEMBLA0A2S3HQI12e-87A0A2S3HQI1_9POAL; Uncharacterized protein
STRINGSi002401m4e-81(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP83223147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.18e-18WRKY DNA-binding protein 46