PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00040.1.g03580.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 485aa MW: 53782.8 Da PI: 10.5402

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00040.1.g03580.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	29.5	1.5e-09	284	326	20	58
S-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS CS WRKY 20 fprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnh 58 r YYrCt++ gC ++k+ve++ ++dp ++ ++Y++eH++ Zjn_sc00040.1.g03580.1.am.mk 284 AKRCYYRCTYHqdhGCLATKHVEQTnSQDPPLFRVIYTNEHTC 326 679*****98999***975268***********98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00774	1.2E-8	273	328	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	4.0E-9	282	327	IPR003657	WRKY domain
Pfam	PF03106	9.1E-11	282	326	IPR003657	WRKY domain
SuperFamily	SSF118290	9.68E-9	283	326	IPR003657	WRKY domain
PROSITE profile	PS50811	9.305	286	324	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence Send to blast
MRSGRRSPHG AAHGRARVHV APQPATKVTF GTEFGSRVRL RSQFTWDDSF CFFVRLRRFS 60 AADTGTFLEL AQTLDDQVTP TVMTWTLPAT DRKVVNQPRK VPGYTHCLKI SRPAHHNYQR 120 GSSGPRKSPR NPLPSPRHGA GRRRLRNPAA ASRSRPLMVV QADETARPGL AAADVRLPPL 180 RLVGAAPARL SYPPEDIGVS ASRSWSSCAY MIYRPRFSVA LDKKNRTRHF HSTCILVKRP 240 SWSFYKGLEA MAKRDDHRTC SSGCSNGTHK RLLRDSSGYS QEHAKRCYYR CTYHQDHGCL 300 ATKHVEQTNS QDPPLFRVIY TNEHTCVSTN ASSIYIQQMA DASLRKAEMG SPGHEVVQEQ 360 EGAIESSLLG VINGGREVAT TSDVMHDMQE NTAALLSSKY FNLSSTVGRS SQKTTPSISP 420 ALPPASEELR MNFVEPLESH CLLGASPFHI PPQSAGVSPS VQGVERSSHG RRKLQRATDR 480 HLQLA

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence Send to blast

MRSGRRSPHG AAHGRARVHV APQPATKVTF GTEFGSRVRL RSQFTWDDSF CFFVRLRRFS  60
AADTGTFLEL AQTLDDQVTP TVMTWTLPAT DRKVVNQPRK VPGYTHCLKI SRPAHHNYQR  120
GSSGPRKSPR NPLPSPRHGA GRRRLRNPAA ASRSRPLMVV QADETARPGL AAADVRLPPL  180
RLVGAAPARL SYPPEDIGVS ASRSWSSCAY MIYRPRFSVA LDKKNRTRHF HSTCILVKRP  240
SWSFYKGLEA MAKRDDHRTC SSGCSNGTHK RLLRDSSGYS QEHAKRCYYR CTYHQDHGCL  300
ATKHVEQTNS QDPPLFRVIY TNEHTCVSTN ASSIYIQQMA DASLRKAEMG SPGHEVVQEQ  360
EGAIESSLLG VINGGREVAT TSDVMHDMQE NTAALLSSKY FNLSSTVGRS SQKTTPSISP  420
ALPPASEELR MNFVEPLESH CLLGASPFHI PPQSAGVSPS VQGVERSSHG RRKLQRATDR  480
HLQLA

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP11814	31	39

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22570.1	3e-09	WRKY DNA-binding protein 38