PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00039.1.g05450.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 199aa MW: 21390.8 Da PI: 7.951 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 37.4 | 4.9e-12 | 66 | 107 | 20 | 58 |
S-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 20 fprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 +p sYYrC ++ gC++kk +r+++dp++++++Y g+H++ Zjn_sc00039.1.g05450.1.am.mk 66 HPPSYYRCRHRhsqGCTAKKMAQRADDDPTLFDVIYYGTHTC 107 799******988889*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 11.853 | 42 | 105 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.9E-9 | 52 | 109 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.02E-11 | 64 | 107 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.9E-11 | 66 | 107 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.6E-12 | 66 | 107 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence Send to blast |
MVTTSVRKVA RHADTGYERC WRGDTAPFPV ACGQVACAPP RSSTDRRRDL RAASGASLQR 60 TRPGGHPPSY YRCRHRHSQG CTAKKMAQRA DDDPTLFDVI YYGTHTCVDT TAATAGQVTA 120 PAPEHDPNTG TLPRRPCGGL IVKTEGLAAA TEPRNGNDNT TTPFCSTSAS PVSWCLSPAT 180 TSDIADEFFD IDVIANFFA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004956613.1 | 7e-27 | probable WRKY transcription factor 70 | ||||
TrEMBL | A0A1E5WLZ7 | 7e-26 | A0A1E5WLZ7_9POAL; Putative WRKY transcription factor 53 | ||||
STRING | Si030528m | 3e-26 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP31717 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46400.1 | 7e-13 | WRKY DNA-binding protein 46 |