 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zjn_sc00039.1.g03100.1.am.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
WRKY |
| Protein Properties |
Length: 309aa MW: 34176.2 Da PI: 8.7454 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00039.1.g03100.1.am.mk | genome | ZGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 59.2 | 8.2e-19 | 89 | 128 | 1 | 39 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEE CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkve 39
++Dgy+WrKYGqK+ +++++pr+Y+rC++a +Cpvkkk
Zjn_sc00039.1.g03100.1.am.mk 89 VKDGYQWRKYGQKVTRDNPYPRAYFRCAHAsSCPVKKKWA 128
58***************************99******965 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 309 aa
Download sequence Send
to blast |
MRQQAAESLE EKLRRVSEEN RRLTCALDAI LADLPHLRAL NASPAPSPSN AAATETVASD 60
AVGVTAEPRP KVATVRVRAE PSDAEANQVK DGYQWRKYGQ KVTRDNPYPR AYFRCAHASS 120
CPVKKKWAQN EFVNDASTSQ PCSISINSLG RTITLGLMNQ GSGSNEEAVV RDAVAPEFRK 180
VLVDELVIFL KNDSEFMESL TSAARKLNVG CVPFQIVSWT SADTTAWCHV ESSFFCEKEK 240
PGRQHDSGIQ GNRDRKSRPS TAFTRTPRRI DESLSPRSVS CWAFPERAPE APLTSRVSSQ 300
PSSDRRYTS
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription repressor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Regulates, probably indirectly, the activation of defense-related genes during defense response (By similarity). Regulates negatively basal innate immunity and XA21-mediated defense against X.oryzae pv. oryzae (Xoo) (By similarity). {ECO:0000250|UniProtKB:Q6EPZ0, ECO:0000250|UniProtKB:Q6QHD1}. |
| UniProt | Transcription repressor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Regulates, probably indirectly, the activation of defense-related genes during defense response (By similarity). Regulates negatively basal innate immunity and XA21-mediated defense against X.oryzae pv. oryzae (Xoo) (PubMed:19825552, PubMed:21961049). {ECO:0000250|UniProtKB:Q6QHD1, ECO:0000269|PubMed:19825552, ECO:0000269|PubMed:21961049}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Might be activated by XA21 in the nucleus upon pathogen infection (PubMed:19825552). Induced by biotic elicitors (e.g. fungal chitin oligosaccharide) (PubMed:23462973). Induced by pathogen infection (e.g. M.grisea and X.oryzae pv. oryzae (Xoo)) (PubMed:16528562, PubMed:24093634). Accumulates after treatment with benzothiadiazole (BTH) and salicylic acid (SA) (PubMed:17601827, PubMed:16528562, PubMed:24093634). Transactivated by WRKY45 (PubMed:24093634). {ECO:0000269|PubMed:16528562, ECO:0000269|PubMed:17601827, ECO:0000269|PubMed:23462973, ECO:0000269|PubMed:24093634, ECO:0000303|PubMed:19825552}. |
| UniProt | INDUCTION: Might be activated by XA21 in the nucleus upon pathogen infection (PubMed:20118235). Induced by biotic elicitors (e.g. fungal chitin oligosaccharide) (By similarity). Induced by pathogen infection (e.g. M.grisea and X.oryzae pv. oryzae (Xoo)). Accumulates after treatment with benzothiadiazole (BTH) and salicylic acid (SA) (PubMed:16528562). Transactivated by WRKY45 (By similarity). {ECO:0000250|UniProtKB:Q6EPZ0, ECO:0000269|PubMed:16528562, ECO:0000303|PubMed:20118235}. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Zhang Y,Wang L
The WRKY transcription factor superfamily: its origin in eukaryotes and expansion in plants.
BMC Evol. Biol., 2005. 5: p. 1
[PMID:15629062] - Wu KL,Guo ZJ,Wang HH,Li J
The WRKY family of transcription factors in rice and Arabidopsis and their origins.
DNA Res., 2005. 12(1): p. 9-26
[PMID:16106749] - Chen X, et al.
A conserved threonine residue in the juxtamembrane domain of the XA21 pattern recognition receptor is critical for kinase autophosphorylation and XA21-mediated immunity.
J. Biol. Chem., 2010. 285(14): p. 10454-63
[PMID:20118235] - Peng Y,Bartley LE,Canlas P,Ronald PC
OsWRKY IIa Transcription Factors Modulate Rice Innate Immunity.
Rice (N Y), 2010. 3(1): p. 36-42
[PMID:21961049] - Park CJ,Ronald PC
Cleavage and nuclear localization of the rice XA21 immune receptor.
Nat Commun, 2012. 3: p. 920
[PMID:22735448] - Chujo T, et al.
OsWRKY28, a PAMP-responsive transrepressor, negatively regulates innate immune responses in rice against rice blast fungus.
Plant Mol. Biol., 2013. 82(1-2): p. 23-37
[PMID:23462973] - Nakayama A, et al.
Genome-wide identification of WRKY45-regulated genes that mediate benzothiadiazole-induced defense responses in rice.
BMC Plant Biol., 2013. 13: p. 150
[PMID:24093634] - Hou Y, et al.
JMJ704 positively regulates rice defense response against Xanthomonas oryzae pv. oryzae infection via reducing H3K4me2/3 associated with negative disease resistance regulators.
BMC Plant Biol., 2015. 15: p. 286
[PMID:26646110] - Liu J, et al.
Alternative Splicing of Rice WRKY62 and WRKY76 Transcription Factor Genes in Pathogen Defense.
Plant Physiol., 2016. 171(2): p. 1427-42
[PMID:27208272]
|
