PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00039.1.g01470.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GeBP
Protein Properties Length: 432aa    MW: 46729.3 Da    PI: 10.2768
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00039.1.g01470.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57396.13.5e-30183280297
                        DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsf 80 
                                   +++rlws  De+v+L+Gl  ++ak+g+   +++di++++  + +++s+kv+k+ql++K+rrLK+K+++  +++k+g++p+f
  Zjn_sc00039.1.g01470.1.sm.mk 183 RPSRLWSTGDELVILRGLAAYRAKHGVlpGSMHDISKLHGRIGNELSVKVTKTQLSDKVRRLKQKYHQLATRTKNGRDPDF 263
                                   679************************877888************************************************ PP

                        DUF573  81 skehdqkifelskkiWg 97 
                                    +++d++++el kk+Wg
  Zjn_sc00039.1.g01470.1.sm.mk 264 PTPQDHSVYELGKKVWG 280
                                   ****************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045045.5E-28185280IPR007592Protein of unknown function DUF573
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005730Cellular Componentnucleolus
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MAPKRPAAAA ASGSASEASD AEMDASRHPS SPSASKTPPS NPNPKPAPAA EDSAAAGSDS  60
GAAYDSDADH RPAPPKSAAS PSRRAARRSP KPRSRSPTPG ANSDSDGSAA PVASEADPAA  120
DSEDVNASPL PPPRSSRAEA VIVKPLSSRP MDPPRRSVPS FSEPRPKRPR SAAVPAVMEQ  180
LKRPSRLWST GDELVILRGL AAYRAKHGVL PGSMHDISKL HGRIGNELSV KVTKTQLSDK  240
VRRLKQKYHQ LATRTKNGRD PDFPTPQDHS VYELGKKVWG AIAGAGGSVI AEYENAGAGY  300
SEEERQNVES DENMDSGRDD RERKNKRLKP IALANGYGKR FGATSASSRG KIEFEKGKDA  360
YPYLWETVED LSRQHPNGVA FKKAFEMIEG PKARVMEEKL RKFRVTEVRH QLRRMELMKE  420
TVKMVLDALE DA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002460312.11e-166STOREKEEPER protein
RefseqXP_004956982.11e-166STOREKEEPER protein
TrEMBLA0A3L6TCP40.0A0A3L6TCP4_PANMI; Uncharacterized protein
STRINGSb02g026310.11e-166(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26713587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.26e-14DNA-binding storekeeper protein-related transcriptional regulator