PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Zjn_sc00039.1.g01470.1.sm.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 432aa MW: 46729.3 Da PI: 10.2768

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00039.1.g01470.1.sm.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	96.1	3.5e-30	183	280	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsf 80 +++rlws De+v+L+Gl ++ak+g+ +++di++++ + +++s+kv+k+ql++K+rrLK+K+++ +++k+g++p+f Zjn_sc00039.1.g01470.1.sm.mk 183 RPSRLWSTGDELVILRGLAAYRAKHGVlpGSMHDISKLHGRIGNELSVKVTKTQLSDKVRRLKQKYHQLATRTKNGRDPDF 263 679**********************877888******************************************** PP DUF573 81 skehdqkifelskkiWg 97 +++d++++el kk+Wg Zjn_sc00039.1.g01470.1.sm.mk 264 PTPQDHSVYELGKKVWG 280 **************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	5.5E-28	185	280	IPR007592	Protein of unknown function DUF573

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005730	Cellular Component	nucleolus

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence Send to blast
MAPKRPAAAA ASGSASEASD AEMDASRHPS SPSASKTPPS NPNPKPAPAA EDSAAAGSDS 60 GAAYDSDADH RPAPPKSAAS PSRRAARRSP KPRSRSPTPG ANSDSDGSAA PVASEADPAA 120 DSEDVNASPL PPPRSSRAEA VIVKPLSSRP MDPPRRSVPS FSEPRPKRPR SAAVPAVMEQ 180 LKRPSRLWST GDELVILRGL AAYRAKHGVL PGSMHDISKL HGRIGNELSV KVTKTQLSDK 240 VRRLKQKYHQ LATRTKNGRD PDFPTPQDHS VYELGKKVWG AIAGAGGSVI AEYENAGAGY 300 SEEERQNVES DENMDSGRDD RERKNKRLKP IALANGYGKR FGATSASSRG KIEFEKGKDA 360 YPYLWETVED LSRQHPNGVA FKKAFEMIEG PKARVMEEKL RKFRVTEVRH QLRRMELMKE 420 TVKMVLDALE DA

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence Send to blast

MAPKRPAAAA ASGSASEASD AEMDASRHPS SPSASKTPPS NPNPKPAPAA EDSAAAGSDS  60
GAAYDSDADH RPAPPKSAAS PSRRAARRSP KPRSRSPTPG ANSDSDGSAA PVASEADPAA  120
DSEDVNASPL PPPRSSRAEA VIVKPLSSRP MDPPRRSVPS FSEPRPKRPR SAAVPAVMEQ  180
LKRPSRLWST GDELVILRGL AAYRAKHGVL PGSMHDISKL HGRIGNELSV KVTKTQLSDK  240
VRRLKQKYHQ LATRTKNGRD PDFPTPQDHS VYELGKKVWG AIAGAGGSVI AEYENAGAGY  300
SEEERQNVES DENMDSGRDD RERKNKRLKP IALANGYGKR FGATSASSRG KIEFEKGKDA  360
YPYLWETVED LSRQHPNGVA FKKAFEMIEG PKARVMEEKL RKFRVTEVRH QLRRMELMKE  420
TVKMVLDALE DA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002460312.1	1e-166	STOREKEEPER protein
Refseq	XP_004956982.1	1e-166	STOREKEEPER protein
TrEMBL	A0A3L6TCP4	0.0	A0A3L6TCP4_PANMI; Uncharacterized protein
STRING	Sb02g026310.1	1e-166	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2671	35	87

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	6e-14	DNA-binding storekeeper protein-related transcriptional regulator