PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00037.1.g04240.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 600aa    MW: 63477.6 Da    PI: 8.2191
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00037.1.g04240.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.6e-18425475256
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                   +y+GVr+++ +gr++AeIrdp     r + ++lg+f++ae Aa+a++aa+++l+g+
  Zjn_sc00037.1.g04240.1.am.mk 425 KYRGVRRRP-SGRYAAEIRDP---A-RkTPIWLGTFDSAEAAARAYDAAARSLRGA 475
                                   8********.7*********8...2.35*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003805.1E-31425488IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-27425483IPR001471AP2/ERF domain
PfamPF008472.3E-11425474IPR001471AP2/ERF domain
PROSITE profilePS5103221.628425482IPR001471AP2/ERF domain
CDDcd000181.39E-13425481No hitNo description
SuperFamilySSF541717.19E-20425483IPR016177DNA-binding domain
PRINTSPR003675.2E-7426437IPR001471AP2/ERF domain
PRINTSPR003675.2E-7448464IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 600 aa     Download sequence    Send to blast
MNAQYKGDKY PSKGVRFKPV EEEIGDVLLE ELDHRLLLPP QQIQPSPDRS EAALSNPGSK  60
QLKCEECGTQ TNAKETMLAE HGPKLNRQGK RKHFVADERR RRWEQDRAEA NDASGGVKAS  120
ERGEGGEKKE AVVAWPGGGG EADCCGWRVV PADEGKKEPR VRGPLAPHQR RVLRMTIQVH  180
FLYKQAYSYC MRSDGRSGKM DEVVRRRTDS LALSAAGGHV AGVSHLVSAA GAGPGSPPPL  240
EIGAAEDWGG ATERCVATTI SSAVQPRDVA GAAIRQAPPT EHGTMRRAQP PLLLCGARPA  300
QVREYAVSHY CPSGWRCGHH RHTELSAAPH PAVEESEKSP QARDAPGECH DSAGVRSRAA  360
DPETWTEGRA PGANQQTERV AAAGPARQTD SQAGRTAAEG RRGGRMPRAR PPPVPAAREA  420
GVEVKYRGVR RRPSGRYAAE IRDPARKTPI WLGTFDSAEA AARAYDAAAR SLRGAAARTN  480
FSASASAQVA APSPAIPPAA TVAAAATSSH SSTVESWSGG IGAPGATIAG ATRAAPAAEE  540
DCRSYCGSSS SVLCDDGVSS AGDEAVAPPT RSSPLPFDLN VADPAAPDEM DWRCDTVLHL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-164254811471Ethylene-responsive transcription factor ERF096
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197102ERRRRW
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4494022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53170.11e-11ethylene response factor 8