PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00034.1.g02740.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family CAMTA
Protein Properties Length: 846aa    MW: 96241.5 Da    PI: 6.4559
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00034.1.g02740.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1162.95.6e-51131283117
                            CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvev 80 
                                     +e k+rwl+++e+++iL+n+e ++++++++++p+sgs++Lynr+++r+fr+DGy+w+kk +gk+ +E+he+LKv++ve+
  Zjn_sc00034.1.g02740.1.sm.mkhc  13 QEtKTRWLRPKEVLQILQNHEWFTIAQKPAQKPPSGSWFLYNRRVLRFFRNDGYKWQKKNNGKASNEAHERLKVDNVEA 91 
                                     5669*************************************************************************** PP

                            CG-1  81 lycyYahseenptfqrrcywlLeeelekivlvhylev 117
                                     l+cyY++s+enp f+rr+yw+L+ ++e+iv+vhy++v
  Zjn_sc00034.1.g02740.1.sm.mkhc  92 LSCYYSRSDENPAFRRRIYWMLDPAYEHIVFVHYRDV 128
                                     **********************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143770.7888134IPR005559CG-1 DNA-binding domain
SMARTSM010762.7E-6111129IPR005559CG-1 DNA-binding domain
PfamPF038592.1E-4515128IPR005559CG-1 DNA-binding domain
CDDcd001028.16E-7311395No hitNo description
Gene3DG3DSA:2.60.40.107.8E-6311399IPR013783Immunoglobulin-like fold
SuperFamilySSF812962.96E-14312393IPR014756Immunoglobulin E-set
Gene3DG3DSA:1.25.40.201.7E-14503599IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484031.45E-13504600IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.592505570IPR020683Ankyrin repeat-containing domain
PfamPF136373.2E-8506559No hitNo description
CDDcd002044.85E-9507555No hitNo description
SMARTSM002480.0049538567IPR002110Ankyrin repeat
PROSITE profilePS5008810.472538570IPR002110Ankyrin repeat
SMARTSM00015250660682IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.632661690IPR000048IQ motif, EF-hand binding site
SMARTSM000150.17705727IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.163706735IPR000048IQ motif, EF-hand binding site
SMARTSM000150.067728750IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.755729757IPR000048IQ motif, EF-hand binding site
PfamPF006120.018730749IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 846 aa     Download sequence    Send to blast
MQQQAFDIHK LEQETKTRWL RPKEVLQILQ NHEWFTIAQK PAQKPPSGSW FLYNRRVLRF  60
FRNDGYKWQK KNNGKASNEA HERLKVDNVE ALSCYYSRSD ENPAFRRRIY WMLDPAYEHI  120
VFVHYRDVLE GSISRSTQND SSTSIQNGSA SRAEVHSSTG WTSELTALCP YSHSPGSGGE  180
VSSRTVTINN EMNYSSLSDR IQEKAALRKL KMQLSLEDKE EYDVNTEEVP SNNEPIVVHE  240
IQNGELESCT DPDDIFNVLD FNEEHTKEAG IHPFLSAIDV LQNSDTWLED DQLEAILHSN  300
SMTVTKKHWF RIDDVCPEWG FCSENTKVII LGDFLCNPAN SCAVMFGDIK VPVETVRPGV  360
IRCHTPCLDL GKVRMYVIDV NGEPCSEARE FEFLERPTKS MIDGNEEPCI EQRVLEFHQK  420
PMKSSEELLL LLNYVQIFFD GNGCEWFSKL KMQLANPDQM KNTYEKHNES TINHVMEVLL  480
NDKFEQWLSS KVEQSSDGDH FLPKQYHTVI HTIAALGYEW ALKPLLSSGV LVNYRDANGW  540
TALHWAARFG REGMVAALLA AGAAAGALSH PTSEDPAAKT PASVASAHGF SGLSAFLSEA  600
QLLTHLDSLE SKENANCNDG ATEGGILSVV ERIWDKCTHV HGGSDDDQLA LKDTLRANRN  660
AVQAAGRIQS AFRVFSFRKK QEMARQNRNS GSLSVHESIA VSHNILEKAA LSIQKNFRCW  720
KKREEFLRMR KNVIKIQARV RAHQEKKKYE ELLRSVGILE KVMLRWYRRG VGLRGFNSGA  780
MLIDEDVGED VVKVFRKQRV ETAIDEAVSR VSSIIDSPLA RQQYRRMLDM YQQAKDCREK  840
VEAADA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004971097.10.0calmodulin-binding transcription activator 4
TrEMBLA0A0A9AIS60.0A0A0A9AIS6_ARUDO; Uncharacterized protein
STRINGSi000282m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP94073440
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.11e-110Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains