PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00033.1.g01120.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 245aa    MW: 27507.2 Da    PI: 9.0765
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00033.1.g01120.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1111.3e-34151431128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   l+pG++F+P d++lvv+yL+ ++ + +l+   +i++ di++++P+dL     ++ +e +fF +r  ++++++r +r++k+g
  Zjn_sc00033.1.g01120.1.sm.mk  15 LAPGYKFNPADQDLVVRYLRCRAVNYQLSS-AIIADKDILDHHPSDLV---PETGSEKFFFYRRVLRSENDTRWKRTAKHG 91 
                                   579************************999.78**************5...34567999********************** PP

                           NAM  82 yWkatgkdkevlsk..kgel.....vglkktLvfykgrapkgektdWvmheyrl 128
                                   yW+a+gk+ +++++  +        vg+k+tLvfy+g+ p+ge+tdWvm ey l
  Zjn_sc00033.1.g01120.1.sm.mk  92 YWRASGKEVPIFCTsvS--SgvplmVGIKRTLVFYHGKPPSGERTDWVMREYCL 143
                                   *************7441..356788***************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.62E-3512149IPR003441NAC domain
PROSITE profilePS5100534.23415159IPR003441NAC domain
PfamPF023651.3E-1717143IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MAASIPLASG VTIPLAPGYK FNPADQDLVV RYLRCRAVNY QLSSAIIADK DILDHHPSDL  60
VPETGSEKFF FYRRVLRSEN DTRWKRTAKH GYWRASGKEV PIFCTSVSSG VPLMVGIKRT  120
LVFYHGKPPS GERTDWVMRE YCLAGGGLSP YRMMWPCMKN NSGHINGTVK VTSKEHYDPS  180
VTPHITAPSI ENVNIMARKP TIIIRANNNA GVEKIRFYDF LGQGNHDDEN QNDDGINHQQ  240
QSVLS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A6e-211514315140Stress-induced transcription factor NAC1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44822369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.23e-29NAC domain containing protein 41