PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00031.1.g00910.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 518aa MW: 57654.4 Da PI: 7.486

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00031.1.g00910.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	43.6	9e-14	64	194	2	126
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk...lelee....vikevd.iykvePwdLpkkvka..eekewyfFskr.dkkya.. 69 G+rF+Pt e+v+++L + ++g+ + + i++++ +y+ eP dL +++ +++ ++F++ ++k++ Zjn_sc00031.1.g00910.1.am.mk 64 HLGYRFQPTPREVVSRHLPRLIAGELslmH---DailpYIHDTNvVYDREPDDLAGMFQPtpATDDRFYFTTVvRQKHRpg 141 57*******************9995542...3333359999637888*843332223345566655404444422 PP NAM 70 tgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmhey 126 + r r++ g W +g+ + ++++ +vg + L + ++g tdW+m+e Zjn_sc00031.1.g00910.1.am.mk 142 SAVRYVRVAGPGSWALQGSMDVLDEAGTVKVGELRRLRYK----KNGAYTDWLMEEC 194 3458888999*****88777779999****97....78999****95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.44E-15	60	199	IPR003441	NAC domain
PROSITE profile	PS51005	17.094	63	214	IPR003441	NAC domain
Pfam	PF02365	4.3E-7	66	193	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence Send to blast
MRAREEDEAG QTREASPSPR VKAKRRAERG RGDPSCDLRD VRRLDRGFPR METPPPIEEE 60 SALHLGYRFQ PTPREVVSRH LPRLIAGELS LMHDAILPYI HDTNVVYDRE PDDLAGMFQP 120 TPATDDRFYF TTVVRQKHRP GSAVRYVRVA GPGSWALQGS MDVLDEAGTV KVGELRRLRY 180 KKNGAYTDWL MEECSCACSV KDAVDGDNER VKKRPQPLSL NAATNKKRPP PLSLKSPSPK 240 RIHRAPVAPI SPLPPAGCTT KSTLPSPYRP VAGPSAPTPP ADQAPHPDTP RPAPVSRLPV 300 PFVSPDPLQS TEDAVDDDFD ELFDKLDTML ACEPAGDEET TADPDDSAET VDELVNIIET 360 SSRCHCIILP HLCCKSQGCW EERTALDFHD RLLAVPRCRI KAQTSCSSVY CAVADEVGVR 420 WGYREHQRRS AALPASDVLR KRMDSPAQKF RARQSVDDFV DCTGRLLAVY LHQDRPTILL 480 PRRHAHLVQS ATCHAASRAV SASTMLSFFL HLSWPLLV

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence Send to blast

MRAREEDEAG QTREASPSPR VKAKRRAERG RGDPSCDLRD VRRLDRGFPR METPPPIEEE  60
SALHLGYRFQ PTPREVVSRH LPRLIAGELS LMHDAILPYI HDTNVVYDRE PDDLAGMFQP  120
TPATDDRFYF TTVVRQKHRP GSAVRYVRVA GPGSWALQGS MDVLDEAGTV KVGELRRLRY  180
KKNGAYTDWL MEECSCACSV KDAVDGDNER VKKRPQPLSL NAATNKKRPP PLSLKSPSPK  240
RIHRAPVAPI SPLPPAGCTT KSTLPSPYRP VAGPSAPTPP ADQAPHPDTP RPAPVSRLPV  300
PFVSPDPLQS TEDAVDDDFD ELFDKLDTML ACEPAGDEET TADPDDSAET VDELVNIIET  360
SSRCHCIILP HLCCKSQGCW EERTALDFHD RLLAVPRCRI KAQTSCSSVY CAVADEVGVR  420
WGYREHQRRS AALPASDVLR KRMDSPAQKF RARQSVDDFV DCTGRLLAVY LHQDRPTILL  480
PRRHAHLVQS ATCHAASRAV SASTMLSFFL HLSWPLLV

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1832	27	99

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02230.1	4e-07	NAC domain containing protein 4