![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zjn_sc00031.1.g00400.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 197aa MW: 21661.5 Da PI: 9.309 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 39 | 1.6e-12 | 140 | 166 | 2 | 28 |
--SS-EEEEEEE--TT-SS-EEEEEE- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCt 28 +Dgy+WrKYG K+++g++f+rsY+r Zjn_sc00031.1.g00400.1.sm.mk 140 EDGYEWRKYGEKSINGAQFTRSYFRSG 166 7***********************954 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.0E-10 | 130 | 165 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.75E-10 | 133 | 164 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.2E-5 | 139 | 193 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 11.061 | 140 | 197 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.1E-9 | 140 | 165 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 197 aa Download sequence Send to blast |
MPDDCEGAVR EVAQVYELIK TKLPLFLLQH HGQQEPPLAQ SLLSEALRAL NIALSAMTMM 60 QKRQQQREIS SSTTASPPVA VLKAKPQMSS PSAAPAAAGS GNGATTRTSA RSGKRRRSSV 120 TEGGKNSSSS WVNVTTVPYE DGYEWRKYGE KSINGAQFTR SYFRSGCNEL DMARIMAESL 180 MGDDPELQLL YNTFKYY |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_004978333.1 | 3e-47 | probable WRKY transcription factor 54 | ||||
Refseq | XP_004978526.1 | 4e-47 | probable WRKY transcription factor 54 | ||||
TrEMBL | K3Y914 | 8e-46 | K3Y914_SETIT; Uncharacterized protein | ||||
TrEMBL | K3ZJB7 | 1e-45 | K3ZJB7_SETIT; Uncharacterized protein | ||||
STRING | Si010706m | 1e-46 | (Setaria italica) | ||||
STRING | Si026670m | 2e-46 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5045 | 26 | 63 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G13960.1 | 2e-07 | WRKY DNA-binding protein 4 |