PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00027.1.g06750.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 267aa    MW: 30104.7 Da    PI: 6.4222
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00027.1.g06750.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY60.53.2e-19130191259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SS.STTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversae.dpkvveitYegeHnhe 59 
                                   +D ++WrKYG K++ gse+pr YY+C+++   +Cp+kk v++ ++ dp  + +t   eH++e
  Zjn_sc00027.1.g06750.1.sm.mk 130 NDRFHWRKYGEKKILGSEYPRLYYKCSYSddhKCPAKKYVQQHNNcDPPQFLVTLVHEHTCE 191
                                   79**************************99999*******9876549999****99999996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-20118191IPR003657WRKY domain
SuperFamilySSF1182902.22E-19125191IPR003657WRKY domain
SMARTSM007742.1E-27129192IPR003657WRKY domain
PROSITE profilePS5081115.996130193IPR003657WRKY domain
PfamPF031069.6E-20130191IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MSTRPKSETV SPPPPSPRAP SNQRDAAIQE LRQQLELIPE VDRLEAAADN VSEIADAMES  60
SLSILQSESE QYYSSEAGAM AMASPAVHSS DGSTGASRIA VPRARKVRHR RGRLGEEVPI  120
KEILTDAPEN DRFHWRKYGE KKILGSEYPR LYYKCSYSDD HKCPAKKYVQ QHNNCDPPQF  180
LVTLVHEHTC EIFFRDEPSS SRSGSLHVLD FRNVSVCPPL TATTLGLKKE EYTNISMYMH  240
SYEYELSQQM MPPNGDQANF SPGPRWS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022681297.11e-89probable WRKY transcription factor 63
TrEMBLK3Z8R33e-88K3Z8R3_SETIT; Uncharacterized protein
STRINGSi022933m5e-89(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP99932944
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.17e-20WRKY DNA-binding protein 55