PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00027.1.g01520.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 942aa MW: 99679.8 Da PI: 8.9043

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00027.1.g01520.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	83.2	2.5e-26	702	760	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YY+Ct++ +Cpv+k+v+r+ ed +v+++tY++ Hnh+ Zjn_sc00027.1.g01520.1.am.mk 702 SDGCQWRKYGQKMPKGNPCPRAYYQCTMSaDCPVHKQVQRCVEDRTVLITTYQNYHNHP 760 7*************************99**************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	6.2E-29	686	762	IPR003657	WRKY domain
SuperFamily	SSF118290	7.59E-25	693	762	IPR003657	WRKY domain
PROSITE profile	PS50811	27.072	696	762	IPR003657	WRKY domain
SMART	SM00774	2.7E-28	701	761	IPR003657	WRKY domain
Pfam	PF03106	1.3E-21	703	760	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 942 aa Download sequence Send to blast
MQDDGKICCP IAIGGIEISE HLARWDPRAD AIVVAEAGIA LAQGDWALKI LPSALAQTWA 60 DGSPWGCVSC GDLEIRSRAS IHGSPPASHM FCISLAPRAT KTSLPPPAVS HLEQRPKGRS 120 SVRRSLHGLM DTRKRKPAAS PTRSPQKPTL NALLRDRDAP ATPRPAGPFL AAISCHAERP 180 EPRIQQEPHE VVPRSVPAGT ANRAAKASNG RAGPARPSSV RSRPLLPRPH ATGTCGPSWA 240 VAALPFSCRA RGFPALPRPR PFLAAAQHHV GRRILSPSQL GAMSISMRLA FPAPAAAPAS 300 PPRLRVRAAG TGASPHVARV AARRRETDAL RGCASLPLKP MPLGAGQPCR RRGDAAVCHS 360 SPYMSAHTMQ WISAGATAGT QGGAILSLAI AGYLAFQHIT RVGEPRLLAR SRLMDSLATG 420 LERSKNDGAA ERERSPSPAA SPPVTLGSDV GAGAEERREI DFFEREKKSA GIDHAPADAD 480 AALDDLRIVK DDLTLNIRRR RKSASEKSSI DDHDGDYHDN SNEGDGRKGN EVDDELELTK 540 AELRCVKEEN ERLRNLISHA NAAYRSLQAH IVRMMEQQQL NVDPEKKEQD ASLLSFGTAP 600 DSGVDSAPSP GKNNLGLGSI APEMMPLPTF DHLRRHLREG GSGTKEAPLP QHFPQGWLPG 660 PDKVPEYLPA KAPEPVPAAG PAGTMRKVRV EVRTRSEAPL ISDGCQWRKY GQKMPKGNPC 720 PRAYYQCTMS ADCPVHKQVQ RCVEDRTVLI TTYQNYHNHP LPPAARAMAS QTAEAASMLL 780 SGSMPTADGS LMAGSNFLAR CAMLPCSSGV ASISASEPFP TVTLDLTHTS TQPPRPVPDQ 840 LQAALAEAAR PVQLPQPHDK LSAVLAAAGV KATDGGVLAD TFSAAAAIIS DPNFTAALAD 900 AITSYIGSGS GSGGSSGTVQ PLESGGDDNS CSKEDKAGGN SS

Sequence ? help Back to Top

Protein Sequence Length: 942 aa Download sequence Send to blast

MQDDGKICCP IAIGGIEISE HLARWDPRAD AIVVAEAGIA LAQGDWALKI LPSALAQTWA  60
DGSPWGCVSC GDLEIRSRAS IHGSPPASHM FCISLAPRAT KTSLPPPAVS HLEQRPKGRS  120
SVRRSLHGLM DTRKRKPAAS PTRSPQKPTL NALLRDRDAP ATPRPAGPFL AAISCHAERP  180
EPRIQQEPHE VVPRSVPAGT ANRAAKASNG RAGPARPSSV RSRPLLPRPH ATGTCGPSWA  240
VAALPFSCRA RGFPALPRPR PFLAAAQHHV GRRILSPSQL GAMSISMRLA FPAPAAAPAS  300
PPRLRVRAAG TGASPHVARV AARRRETDAL RGCASLPLKP MPLGAGQPCR RRGDAAVCHS  360
SPYMSAHTMQ WISAGATAGT QGGAILSLAI AGYLAFQHIT RVGEPRLLAR SRLMDSLATG  420
LERSKNDGAA ERERSPSPAA SPPVTLGSDV GAGAEERREI DFFEREKKSA GIDHAPADAD  480
AALDDLRIVK DDLTLNIRRR RKSASEKSSI DDHDGDYHDN SNEGDGRKGN EVDDELELTK  540
AELRCVKEEN ERLRNLISHA NAAYRSLQAH IVRMMEQQQL NVDPEKKEQD ASLLSFGTAP  600
DSGVDSAPSP GKNNLGLGSI APEMMPLPTF DHLRRHLREG GSGTKEAPLP QHFPQGWLPG  660
PDKVPEYLPA KAPEPVPAAG PAGTMRKVRV EVRTRSEAPL ISDGCQWRKY GQKMPKGNPC  720
PRAYYQCTMS ADCPVHKQVQ RCVEDRTVLI TTYQNYHNHP LPPAARAMAS QTAEAASMLL  780
SGSMPTADGS LMAGSNFLAR CAMLPCSSGV ASISASEPFP TVTLDLTHTS TQPPRPVPDQ  840
LQAALAEAAR PVQLPQPHDK LSAVLAAAGV KATDGGVLAD TFSAAAAIIS DPNFTAALAD  900
AITSYIGSGS GSGGSSGTVQ PLESGGDDNS CSKEDKAGGN SS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
2ayd_A	7e-18	689	764	2	76	WRKY transcription factor 1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025881266.1	1e-128	probable WRKY transcription factor 31
TrEMBL	A0A0E0L5U9	1e-133	A0A0E0L5U9_ORYPU; Uncharacterized protein
STRING	OPUNC05G23690.1	1e-134	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP12695	27	34

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	1e-71	WRKY family protein