PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zjn_sc00026.1.g01570.1.sm.mkhc | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | BES1 | ||||||||
Protein Properties | Length: 122aa MW: 13297.2 Da PI: 11.0512 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 166.7 | 1.4e-51 | 19 | 94 | 1 | 76 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl 76 gg+gr+ptw+ErEnnkrRERrRRaiaaki+aGLRa+G+yklpk++DnneVlkALc+eAGwvve+DGttyrk+ +++ Zjn_sc00026.1.g01570.1.sm.mkhc 19 GGGGRMPTWRERENNKRRERRRRAIAAKIFAGLRAHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKQASRT 94 689********************************************************************99987 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 2.0E-46 | 20 | 94 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 122 aa Download sequence Send to blast |
MESGGGGGGG GPFVPGGGGG GGRMPTWRER ENNKRRERRR RAIAAKIFAG LRAHGGYKLP 60 KHCDNNEVLK ALCNEAGWVV EPDGTTYRKQ ASRTHGWNWM LRVTKPILLL SDKSTGIIQC 120 KP |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 8e-22 | 23 | 89 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 8e-22 | 23 | 89 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 8e-22 | 23 | 89 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 8e-22 | 23 | 89 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | BT036557 | 1e-100 | BT036557.1 Zea mays full-length cDNA clone ZM_BFb0123H10 mRNA, complete cds. | |||
GenBank | EU968491 | 1e-100 | EU968491.1 Zea mays clone 321364 brassinazole-resistant 1 protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_010675300.1 | 4e-36 | PREDICTED: BES1/BZR1 homolog protein 4 | ||||
Swissprot | Q6EUF1 | 3e-29 | BZR4_ORYSJ; Protein BZR1 homolog 4 | ||||
TrEMBL | B8A6K9 | 4e-40 | B8A6K9_ORYSI; Uncharacterized protein | ||||
TrEMBL | B9ETZ2 | 5e-40 | B9ETZ2_ORYSJ; Uncharacterized protein | ||||
STRING | XP_010675300.1 | 1e-35 | (Beta vulgaris) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1366 | 38 | 112 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G78700.1 | 8e-25 | BES1/BZR1 homolog 4 |