PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00025.1.g04830.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 476aa    MW: 52073.7 Da    PI: 10.4647
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00025.1.g04830.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.75.2e-123113501355
                           AP2  13 grWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   g+WvAeIr+p   + r +r++lg+f+ a +Aa a+++a+ +++g
  Zjn_sc00025.1.g04830.1.am.mk 311 GKWVAEIREP---N-RgRRYWLGTFDNAVDAALAYDRAAVCIYG 350
                                   8********8...3.35**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103216.529289360IPR001471AP2/ERF domain
CDDcd000184.72E-18309360No hitNo description
SuperFamilySSF541711.96E-14309361IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.0E-20309361IPR001471AP2/ERF domain
SMARTSM003803.0E-18309366IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    Send to blast
MAHLPLLTWV VPARRAQKQD PPAAGPRGGW LGQGGHWPWP IGRVKIELGE SDAHAPIGAL  60
APGKEDPGTD RPLFPCWRES IGGKLRSSQA DASDPIAVRG WPGSTPAVGA ACYGAPRLPR  120
TLVLPSLFQE DSSRSDDSVS QAVFVRFAKQ TDLLPQASIA SQGAPPRSYT TCLERNVDFN  180
IRRLRRRLSP FQRATATAPR TARQDRTQKA KTAVRTQNPP WASFTASRRS LLFVPKNGRR  240
RGRRADRPRA SACGRGTPWE WWEWGCRARK WSGRRVLPPR RPLEVLGRRD KGREGRTTCA  300
TTSAACGSPV GKWVAEIREP NRGRRYWLGT FDNAVDAALA YDRAAVCIYG AHARERLNFP  360
AAAAAAVTSA ATPQRQPTFG SPAAATDAFQ ERGVKPVVSG TQGGGLAISS TQQQRGSSWT  420
PAAAKPDEEA WDDCFDDIAM YMDLDAVSDV VPCYRGMKKE DCQFDELDVS LWPLDG
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP141022226
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.15e-09ERF family protein