 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zjn_sc00025.1.g03060.1.sm.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
ERF |
| Protein Properties |
Length: 203aa MW: 21335 Da PI: 5.2093 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00025.1.g03060.1.sm.mk | genome | ZGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 65.2 | 1.4e-20 | 21 | 71 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
s+++GVr+++ +g+W+AeIrdp + +r++lg+f tae Aa+a+++a+++++g
Zjn_sc00025.1.g03060.1.sm.mk 21 SRFRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDEAALRFRG 71
789*******.**********7.....337************************998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 203 aa
Download sequence Send
to blast |
MDEQQFSTPT AEASGGDGGG SRFRGVRQRP WGKWAAEIRD PHKAARVWLG TFETAEAAAR 60
AYDEAALRFR GSRAKLNFPE DARLPPAGTV TSAATPTTAS STSAYPASAV SEYLQYQTLL 120
QGSGAHGGFP QYYGDGGAMS SSSGSYSFPA SSVTVASVPS STSSAPGYGE EAQWSWQESA 180
WNYPATATTG SWSGSSYYPP PSQ
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EU956367 | 8e-86 | EU956367.1 Zea mays clone 1561370 hypothetical protein mRNA, complete cds. |
