PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00025.1.g02120.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 398aa    MW: 42360.3 Da    PI: 8.3463
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00025.1.g02120.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.47.2e-13189230146
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaa 46 
                                   ++ykGVr+++ +g+Wv+eIr+p +   r r +lg++  +e Aa+ a
  Zjn_sc00025.1.g02120.1.am.mk 189 CRYKGVRRRR-WGKWVSEIRVPGT---RERLWLGSYAAPEAAARVA 230
                                   78*****777.**********943...5***************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.9E-6189230IPR001471AP2/ERF domain
CDDcd000186.42E-12189220No hitNo description
PROSITE profilePS5103215.633190233IPR001471AP2/ERF domain
SMARTSM003804.9E-11190248IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-16190233IPR001471AP2/ERF domain
SuperFamilySSF541715.82E-11190232IPR016177DNA-binding domain
PRINTSPR003677.8E-7191202IPR001471AP2/ERF domain
PRINTSPR003677.8E-7213229IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MPTCREFKHT VILAASRHGL PITVSFDTAV STTGMLTLTP NWFHRLDPLA GVCVSACAST  60
RTTTVTVVGP LRPAAPSHTQ KSASRSQIHL FASVATGQND RTFQTGQWLT TRLLAGIGSF  120
DHDGGRAQDP WSAPSAALTS PFPQTRTPPS QARRLEVEPT ERAWGLGTRA GHRRREACAT  180
MSGGADRRCR YKGVRRRRWG KWVSEIRVPG TRERLWLGSY AAPEAAARVA SDAGMAADAQ  240
LLEARERASP VSPARQLVDR VGIGVARCGG HDEMEQWPYA ATAGGDGAGI ASATATATSW  300
GTAPRSDGSR SSSAGTACEL ERRLVYGDIS VDDIDILIVS SLPCHGPTAM NLSDASTAGQ  360
HGSLVVAPAE NEQVHEPESN ALRDATRCIW SVSVSDSE
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9545305e-36EU954530.1 Zea mays clone 1469452 transcriptional factor TINY mRNA, complete cds.
GenBankKJ7276765e-36KJ727676.1 Zea mays clone pUT5603 AP2-EREBP transcription factor (EREB63) gene, partial cds.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2440734