 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Zjn_sc00024.1.g02600.1.sm.mkhc |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
WRKY |
| Protein Properties |
Length: 211aa MW: 22646.8 Da PI: 5.2994 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00024.1.g02600.1.sm.mkhc | genome | ZGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 96 | 2.5e-30 | 114 | 172 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDg++WrKYG+K vk+s++pr+YYrC+ gC vkk+ver+++dp++v++tY g Hnh
Zjn_sc00024.1.g02600.1.sm.mkhc 114 LDDGFKWRKYGKKAVKNSPNPRNYYRCSVDGCGVKKRVERDRDDPRYVITTYDGVHNHA 172
59********************************************************6 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
| GO:0050832 | Biological Process | defense response to fungus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 211 aa
Download sequence Send
to blast |
MGSMAASLGL NPEAAFFNPC SAYSASSPFM TAADFAASFP ASEPDDAAAG AFFAELDDDC 60
RLFDFGYSPA ASVFADDGDG DDHNEKKMRY ADDEKGLRVN GRIGFRTRSE VEILDDGFKW 120
RKYGKKAVKN SPNPRNYYRC SVDGCGVKKR VERDRDDPRY VITTYDGVHN HASPAAAVVQ 180
YGGGGAHGFY SPPHSGSPAA AASYSSGSLL F
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EU960054 | 3e-73 | EU960054.1 Zea mays clone 221474 WRKY67 - superfamily of TFs having WRKY and zinc finger domains mRNA, complete cds. |
