|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zjn_sc00023.1.g06550.1.sm.mk |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
Family |
B3 |
Protein Properties |
Length: 413aa MW: 44592.3 Da PI: 6.1769 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zjn_sc00023.1.g06550.1.sm.mk | genome | ZGD | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 32.4 | 1.6e-10 | 312 | 368 | 35 | 89 |
EEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
B3 35 tltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89
l + d++ +W++k++y ++ks++y+l+ + eFvk ++L++gD++v++ ++r++
Zjn_sc00023.1.g06550.1.sm.mk 312 ILEMDDLELpDVWKFKYRYwpNNKSRMYILE-STGEFVKRHKLEAGDVFVIYQHKRTG 368
455555333589*******887888888888.9******************9544433 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 413 aa
Download sequence Send
to blast |
MADATGSSSG AGAGAGAATG HGDLGWGVTQ GQYQVYLTSS TNGIAPNAAN IYPPTHQYPI 60 GLIPAQRPMN SSPIAAPPQQ LVPPPQYHVV QSQPPPTAGR YQHQDYPAYG NTAPSTTPVG 120 FAGWRMYSNT LMSFSQPAPL SGGGGGNSNI SVVNSNGFHQ NSSSYATTMW TNYVPSNQPY 180 YTNYAPAATI NPVLQAPAIQ NINNHQERDL GFAPSFGATA PTVPSIHYEV MPQRTTNSST 240 AQLFQEVKNS TFRTSGPGGE IEGSEASEEQ DPAPELEAQN QLGQGFRDIN ATDNTRDAEA 300 NLPALIDKDG IILEMDDLEL PDVWKFKYRY WPNNKSRMYI LESTGEFVKR HKLEAGDVFV 360 IYQHKRTGRH VARAVKAIPQ SSNLNLLECQ CMREGRSSEE CGFAVSAPPP KKT
|
3D Structure ? help Back to Top |
|
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j9b_A | 1e-23 | 296 | 388 | 25 | 116 | B3 domain-containing transcription factor FUS3 |
6j9b_D | 1e-23 | 296 | 388 | 25 | 116 | B3 domain-containing transcription factor FUS3 |
Search in ModeBase |