PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00023.1.g01940.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 574aa    MW: 61106.8 Da    PI: 9.0711
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00023.1.g01940.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.31e-30340398259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  Zjn_sc00023.1.g01940.1.am.mk 340 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 398
                                   699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.925334400IPR003657WRKY domain
SuperFamilySSF1182904.45E-26337400IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.4E-30337400IPR003657WRKY domain
SMARTSM007741.4E-37339399IPR003657WRKY domain
PfamPF031061.3E-25341398IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 574 aa     Download sequence    Send to blast
MQGVACVASV MPSVSGSSKK TRRAAAGRST SWARGVSTQF FTMHACVAFY HATTARRGHA  60
ALRVEVAQRP DSRPHHHHHH HHWRPGPGKG QPPSVRPSRA RGISRRCPSQ RARAMCDYFL  120
QRMDGDQAGG DLTDIVRAGG GVPGNAEVPS TVAEWQLQGE PRLFPPLPPS SEGCAGSTGA  180
DVFGDPFFGL GDPFSTDYSS GADFLDAMPD AMAKVGFDTA VGCGGGGSGQ MLDMSRKPIL  240
PRGVQMPAVG LLGPRMLPSP LSPPRAIRPY PPMGGDMVKL GITAGQMAGC AIDAAVVGMQ  300
MSSPRSAGGI KRRKNQARKV ICIPAPTAAG ARPTGEVVPS DLWAWRKYGQ KPIKGSPYPR  360
GYYRCSSSKG CSARKQVERS RTDPNMLVIT YTSEHNHPWP TQRNALAGST RNHHSKNGGS  420
SSGSKSSQNE KQKQPNVKEE ESKDQATTAA TTASTITTTT STSPVAAVKE EALAQPAGPE  480
ALARAIDATG AVDHNNMALM DHVFSESYKP MIPETGQPDD FFSDLAELES DPMSLIFSKE  540
YMEAKPAGGD EDRANEKAFN ERIPVDLDVV PAAD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B3e-24314401280Disease resistance protein RRS1
5w3x_D3e-24314401280Disease resistance protein RRS1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025825027.10.0probable WRKY transcription factor 35
TrEMBLA0A2T7CZC80.0A0A2T7CZC8_9POAL; Uncharacterized protein
STRINGSi011735m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25923888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.12e-59WRKY DNA-binding protein 35