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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zjn_sc00023.1.g00460.1.sm.mk |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
HD-ZIP |
Protein Properties |
Length: 507aa MW: 54004.3 Da PI: 6.8127 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zjn_sc00023.1.g00460.1.sm.mk | genome | ZGD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 66.8 | 2.8e-21 | 116 | 171 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++ +++t++q+++Le+lF++ ++p++++r+eL+k+lgL+ rq+k+WFqNrR+++k
Zjn_sc00023.1.g00460.1.sm.mk 116 KKRYHRHTPHQIQQLEALFKQYPHPDEKQRAELSKRLGLEPRQIKFWFQNRRTQMK 171
678899***********************************************999 PP
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2 | START | 79.2 | 9.7e-26 | 257 | 329 | 133 | 206 |
TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
START 133 eqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
+q+ + s+v +++ pSg+++++++ng +kvtwveh++++++++h+l+r+l++sgla+ga +w+atlqrqce+
Zjn_sc00023.1.g00460.1.sm.mk 257 PQMHS-LDSSVNCRRQPSGCVMQDTPNGLCKVTWVEHTEYDEASVHQLYRPLLQSGLAFGAGRWLATLQRQCEC 329
55555.6899**************************************************************96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0008289 | Molecular Function | lipid binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 507 aa
Download sequence Send
to blast |
MSFGGLFDGC EGPGAMAGVQ YPAVSGVVAS SPALSLALAG RGRDGGIGRT GSSAGRDGGV 60 GRTDSSSAVR GGGIAATDVS EVVENDSLSA CDHADAVFSG GGSEDDADAG NPRKRKKRYH 120 RHTPHQIQQL EALFKQYPHP DEKQRAELSK RLGLEPRQIK FWFQNRRTQM KTQLERHENA 180 LLKQENDKLR AENQSVREAL TNLVCGNCGG PAMLGEVSLE EHHLRLENAR LRDELTHVCA 240 LAAKFIDKPI SPMAAPPQMH SLDSSVNCRR QPSGCVMQDT PNGLCKVTWV EHTEYDEASV 300 HQLYRPLLQS GLAFGAGRWL ATLQRQCECL AILMSSIAMP ERDSAGVRAS SAREWSKLDC 360 LTGSIGADVR VMVRKSVDEP GVPPGVVLSA ATSPTSPNQN SMLILQETCT DESGAMVVYA 420 PVDIPAMQLV MGGGDSTCVA LLPSGFAILP GGPCISAKTN GSLLTVAFQI LVNSQPTAKL 480 TAESVDTVNN LIACTIKKIK AALHCDV
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 111 | 117 | PRKRKKR |
2 | 112 | 116 | RKRKK |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |