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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zjn_sc00022.1.g05270.1.am.mk |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
B3 |
Protein Properties |
Length: 413aa MW: 44215.2 Da PI: 9.3381 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zjn_sc00022.1.g05270.1.am.mk | genome | ZGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 95.4 | 3.7e-30 | 100 | 192 | 1 | 89 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT-- CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk 75
f+kv tpsdv+k++rlv+pk++ae++ + ++ l++ed+ g++W+++++y+++s++yv+tkGW++Fvk+++L
Zjn_sc00022.1.g05270.1.am.mk 100 FDKVVTPSDVGKLNRLVIPKQYAEKYfpldsaA--NDKGLLLSFEDSAGKQWRFRYSYWNSSQSYVMTKGWSRFVKEKRLV 178
89*************************999643..447789**************************************** PP
TT-EEEEEE-SSSE CS
B3 76 egDfvvFkldgrse 89
+gD+v F++ +e
Zjn_sc00022.1.g05270.1.am.mk 179 AGDTVSFSRAAAEE 192
********663322 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 413 aa
Download sequence Send
to blast |
MDHFPASGRF SKEEEADEEQ AEDAPNSRRE IPFMPACSAA TASSSAAASA SSASAASASA 60 SSSVPFRSAS GDGAGASGSG AGGGEEGEEK AEAVEKEHMF DKVVTPSDVG KLNRLVIPKQ 120 YAEKYFPLDS AANDKGLLLS FEDSAGKQWR FRYSYWNSSQ SYVMTKGWSR FVKEKRLVAG 180 DTVSFSRAAA EEARHRLFID WKRRTDNRDP FRFPRFALPL PLASHYGPHY SPWGYGGGGG 240 SGFFLPPSPP ATLYEHRLRQ GLDFRGMNYH PAPAVGRQIL YFGSARMPPH APLLPRAPSP 300 LQYTVQPSGA GVTAASPVVL DSVPVIESPT TGAKRVRLFG VNLDNRDSGG GGGEPSNLQG 360 NTLSLQMPGR QQRTPTLRLL ELPLRGAQSS AASSPSSSSS SKRDARSALD LDL
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 2e-57 | 95 | 204 | 3 | 113 | B3 domain-containing transcription factor NGA1 |
5os9_B | 2e-57 | 95 | 204 | 3 | 113 | B3 domain-containing transcription factor NGA1 |
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