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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Zjn_sc00022.1.g04320.1.sm.mkhc |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
bHLH |
| Protein Properties |
Length: 261aa MW: 29285.1 Da PI: 7.5986 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00022.1.g04320.1.sm.mkhc | genome | ZGD | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 33.8 | 6e-11 | 63 | 109 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
+a+ + Er RR+++N ++ Lr+l P++ +K + a+i+ A+eYI+ L
Zjn_sc00022.1.g04320.1.sm.mkhc 63 KANFATERERREQLNVKYGALRSLFPNP-----TKGDRASIVGDAIEYINAL 109
68899***********************.....9***************987 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 261 aa
Download sequence Send
to blast |
MADLYHSLPQ NYDLLISNDE RDGMIGAPGA SENIFQEING GQFDSPTQGR RRQKGGFGKA 60
KGKANFATER ERREQLNVKY GALRSLFPNP TKGDRASIVG DAIEYINALN KTMKEMKILV 120
EKKRNNTDRR KKLDDEAADD GDSSSVQPVR NDLNDEMHGA LKSFWVQKRS KDCEVDVRIV 180
HDEINIKFTE NKRTDSLLCA TKVLEEFHLD LINVVGGTIG DHHTFMFNTK IPKGSSVFAC 240
AVAKKLIEAV EMKNQALDIL N
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in the regulation of tapetum programmed cell death (PCD) and degradation during male reproductive development (PubMed:23519457, PubMed:23385589). Interacts with TDR and promote tapetal PCD by regulating the expression of RTS, and the two lipid-transfer proteins C4 and C6, which function in microspore development (PubMed:23519457). Acts downstream from and interacts with TDR in the regulation of tapetal PCD. Regulates directly the aspartic protease AP25 and AP37 during tapetal PCD (PubMed:23385589). May not target the cysteine protease CP1 (PubMed:23519457, PubMed:23385589). {ECO:0000269|PubMed:23385589, ECO:0000269|PubMed:23519457}. |
