 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zjn_sc00020.1.g06550.1.sm.mkhc |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
Family |
E2F/DP |
Protein Properties |
Length: 241aa MW: 25532.2 Da PI: 6.9559 |
Description |
E2F/DP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zjn_sc00020.1.g06550.1.sm.mkhc | genome | ZGD | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | E2F_TDP | 25.2 | 2.8e-08 | 89 | 128 | 2 | 38 |
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse.....d 38
++++Lr+++++ ++ek+e+ g++t+neva+eLv e +
Zjn_sc00020.1.g06550.1.sm.mkhc 89 NGRGLRQFSMR---VCEKVESkGRTTYNEVADELVVEfsdpnN 128
789********...*****999************998665552 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 241 aa
Download sequence Send
to blast |
MASGALQSGG AAHSASNSGG SPSGHAASDR GAASASISTP ASGSTVARRL DALDLQGDDA 60 PSSQPAARFV SPKRKKKKRC ARAVGPEKNG RGLRQFSMRV CEKVESKGRT TYNEVADELV 120 VEFSDPNNVD SPDPDNPNAT RPHATVEVEI SEDMQLVHFD FNSTPFELQD DSFVLKAMGL 180 SGKEETDMVQ VPDANGGSVE CSSTPNNHWH QSQTPARPKG LRLPPSAPIP GILKGRVKHE 240 H
|
Nucleic Localization
Signal ? help
Back to Top |
 |
No. |
Start |
End |
Sequence |
1 | 72 | 78 | KRKKKKR |
2 | 73 | 78 | RKKKKR |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. The complex DPB/E2FC restricts cell division and lateral root initiation and may function as a negative regulator of E2F-regulated genes. The interaction with SKP2A is controlled by auxin. {ECO:0000269|PubMed:11891240, ECO:0000269|PubMed:16920782}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | BT009415 | 1e-54 | BT009415.1 Triticum aestivum clone wlmk1.pk0005.e2:fis, full insert mRNA sequence. |