 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zjn_sc00018.1.g06310.1.am.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 285aa MW: 30989.5 Da PI: 4.5687 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00018.1.g06310.1.am.mk | genome | ZGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59 | 7.7e-19 | 87 | 142 | 2 | 56 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56
r+++++t+eq+++Le Fe+ +r++ e++ eLA++lg+ rqV vWFqNrRa+++
Zjn_sc00018.1.g06310.1.am.mk 87 RTKRRLTAEQVQALEVSFEEeKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWR 142
77889**************98**********************************9 PP
|
| 2 | HD-ZIP_I/II | 119.1 | 2.3e-38 | 88 | 179 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLe 81
krrl++eqv++LE sFeee+ kLeperK+elar+Lg+ prqvavWFqnrRAR++tkqlE+d+++L++a+d+l + +++L
Zjn_sc00018.1.g06310.1.am.mk 88 TKRRLTAEQVQALEVSFEEEKrKLEPERKSELARRLGIAPRQVAVWFQNRRARWRTKQLEQDFDRLRAAHDELLAGRDALV 168
69****************9999*********************************************************** PP
HD-ZIP_I/II 82 keveeLreelk 92
+++++Lr+++
Zjn_sc00018.1.g06310.1.am.mk 169 TDNDRLRSQVI 179
*******9986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 285 aa
Download sequence Send
to blast |
MDSGRLMISS AAAPFCSAGA GGSQVLQFGG GFRGGTSMAA AVAENGRRKR PFFTPHEALQ 60
LELGLDIMDD VDQLCGFEYE LQGAPERTKR RLTAEQVQAL EVSFEEEKRK LEPERKSELA 120
RRLGIAPRQV AVWFQNRRAR WRTKQLEQDF DRLRAAHDEL LAGRDALVTD NDRLRSQVIR 180
LTEKLQAKEP PVTQAEEQSA PNPSGPADNT AMQAAAPSSA GSYFAAGAPS PPSSSEGDCG 240
GDEGSALFLP ADAMLLAAVE QGRGLGAEED SWEWFWNPES PLLSE
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK356850 | 2e-87 | AK356850.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1041A16. |
