PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00018.1.g05220.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 893aa    MW: 95975.1 Da    PI: 8.1075
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00018.1.g05220.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY80.81.4e-25120181159
                                   ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                   +dDg +WrKYGqKe+ g+++pr+YYrCt++   gC ++k+v+r++edp+++++ Y g H+++
  Zjn_sc00018.1.g05220.1.am.mk 120 VDDGRSWRKYGQKEILGAKYPRAYYRCTHRhtqGCAATKQVQRTDEDPELFDVFYVGAHTCR 181
                                   58***************************98999*************************996 PP
2WRKY24.84.2e-08794814121
                                   ---SS-EEEEEEE--TT-SS- CS
                          WRKY   1 ldDgynWrKYGqKevkgsefp 21 
                                   +dDg++WrKYGqK++ g+++p
  Zjn_sc00018.1.g05220.1.am.mk 794 VDDGHSWRKYGQKDILGAKHP 814
                                   59*****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081121.345115183IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.9E-25117181IPR003657WRKY domain
SuperFamilySSF1182902.88E-23118182IPR003657WRKY domain
SMARTSM007742.2E-36120182IPR003657WRKY domain
PfamPF031061.7E-24121181IPR003657WRKY domain
PROSITE profilePS508119.064789824IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.2E-6790815IPR003657WRKY domain
SuperFamilySSF1182904.05E-6791815IPR003657WRKY domain
SMARTSM007749.1E-4794832IPR003657WRKY domain
PfamPF031061.7E-5795815IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 893 aa     Download sequence    Send to blast
MESLDSSGGS RLLAVTELSH IKELAKQLEE QLGGSRDLCK HLASQIFSLT ERSIGIITCC  60
SDFGGARKRS ATDAGLAAAT PGSLGQLADA PFKTTKKRKM MEKMKSQVRV SSGGGCETPV  120
DDGRSWRKYG QKEILGAKYP RAYYRCTHRH TQGCAATKQV QRTDEDPELF DVFYVGAHTC  180
RVHNTAADEA ASATPPPDQH NPDAHSLLHN LTAKTEEGLA VAGEPQGWDW DATAPFGMSA  240
APASLCLAAE SCPFSAPSTS DNRGVLSPAS SELNHAPSFP TFDAGEWRAQ SELQGVVSAL  300
VVAGTPPAPD CMDGTDELLD DIDVSFFLAA EEGRSTNFPF WFTDRDERSP HRHRPGGASV  360
RPSVTRTATA ARIVETSVRR PLCPSRASPR GEFVVPARGS ASPPGRKIPR PCFPTPRRIW  420
WSRVDSLREG ESPPDVTLPD LPHVTLKLDR DRLGTMSVPP SHAALRMANL AVPPTQLDLD  480
LDLDRLGIAH EPPTAAEVTT FPAQRVNRKA SPPHVRPGIS FHDASPMHGS PSCEPIDDQL  540
ITIRQQFYPS RTKLTVKHQL PQSPLAIAKR ALPKGSSCLQ DLALGHARRC AEFRSGRSDT  600
TLIVAQSSPG THSRLIIPHH RSKSLLPPPH HQNAASIGPL QHVLAPACLP PVPQQHHSDR  660
REENQLLEME GGVYCGGGSR LVVMELSHIK ELVTQLEVHL GESPDLCKRL ASQIFSLTER  720
SIGIITSSSS GFDGGRKRSA EDAGLGSATP SPLSDVVVDA PFKNNKKRKM MEKRKHQVRV  780
SPAAAGGGGE TTPVDDGHSW RKYGQKDILG AKHPSGPARS LPATHSSPSH PNLSSGARPV  840
DVEENAGAHG MYQIRAGGVP GAGEKGGLLR AAPGDKYSDT ALVLPICHGR DFE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-22120181869OsWRKY45
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025800891.11e-107probable WRKY transcription factor 30
TrEMBLA0A2S3GYW51e-105A0A2S3GYW5_9POAL; Uncharacterized protein
STRINGPavir.Ba02545.1.p1e-96(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108638131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.16e-29WRKY DNA-binding protein 30