 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zjn_sc00017.1.g05700.1.sm.mkhc |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
WRKY |
| Protein Properties |
Length: 235aa MW: 25247.3 Da PI: 10.6121 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00017.1.g05700.1.sm.mkhc | genome | ZGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 95.4 | 4.1e-30 | 158 | 215 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D y+WrKYGqK++kgs++pr+YY+C++ gCp++k+ver+ +p ++++tYeg+H+h+
Zjn_sc00017.1.g05700.1.sm.mkhc 158 DDYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERDPGEPAMLIVTYEGDHRHD 215
99***********************9888****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 235 aa
Download sequence Send
to blast |
MEDLMRRVGG SVPGDARGGG QLTPRLRAAM ASVLSRRTGH ARFRRGPVVV PPAEHLQQTP 60
DGAAAKMDAA FSASASSSHP STTLVSFTVT AGGEGSVSGG YRGLFQSASD RARSENDDGA 120
GGKPRGGRCH CSKKRKPRVV KVIRVPAISS RNADIPPDDY SWRKYGQKPI KGSPYPRGYY 180
KCSTVRGCPA RKHVERDPGE PAMLIVTYEG DHRHDTRPAP DQGIERHAGV DADRH
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | FP094685 | 7e-99 | FP094685.1 Phyllostachys edulis cDNA clone: bphyem111b06, full insert sequence. |
