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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00017.1.g03230.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 241aa MW: 26436.1 Da PI: 8.0849 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 32.5 | 2.5e-10 | 105 | 151 | 1 | 49 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49 lppGf+F P+de+lv ++L++k+++ +++ ++i++v +++++Pw+L++ Zjn_sc00017.1.g03230.1.am.mk 105 LPPGFHFFPSDEDLVIHFLRRKAANVPCRP-DIIPTV-LHRYDPWELNA 151 79*************************999.778876.99*******73 PP | |||||||
2 | NAM | 44.4 | 5.4e-14 | 152 | 205 | 74 | 128 |
NAM 74 knratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + r+ sg W+ g d++v++ +g vglkkt++f +g+ kg kt+Wvmhey+l Zjn_sc00017.1.g03230.1.am.mk 152 QGRTSPSGCWNPIGADETVTC-SGCSVGLKKTFIFCTGEPFKGFKTNWVMHEYHL 205 568889***************.9999***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.62E-34 | 99 | 212 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 13.367 | 105 | 235 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.6E-15 | 106 | 205 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence Send to blast |
MRKANPKGGG WLGLETGWGS DEGREAADYR LLNLDKNLPS VLIGSHHLSQ LVLIDMGTNV 60 ICNRLQSLST LLDLHVSPSL CPSPPYKYHS VARTDHIRMG GATNLPPGFH FFPSDEDLVI 120 HFLRRKAANV PCRPDIIPTV LHRYDPWELN AQGRTSPSGC WNPIGADETV TCSGCSVGLK 180 KTFIFCTGEP FKGFKTNWVM HEYHLLDGGG YNASGGSTSG VQQLGDMPSL RIKLRRASEL 240 P |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-21 | 104 | 214 | 16 | 151 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-21 | 104 | 214 | 16 | 151 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-21 | 104 | 214 | 16 | 151 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-21 | 104 | 214 | 16 | 151 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-21 | 104 | 214 | 19 | 154 | NAC domain-containing protein 19 |
3swm_B | 1e-21 | 104 | 214 | 19 | 154 | NAC domain-containing protein 19 |
3swm_C | 1e-21 | 104 | 214 | 19 | 154 | NAC domain-containing protein 19 |
3swm_D | 1e-21 | 104 | 214 | 19 | 154 | NAC domain-containing protein 19 |
3swp_A | 1e-21 | 104 | 214 | 19 | 154 | NAC domain-containing protein 19 |
3swp_B | 1e-21 | 104 | 214 | 19 | 154 | NAC domain-containing protein 19 |
3swp_C | 1e-21 | 104 | 214 | 19 | 154 | NAC domain-containing protein 19 |
3swp_D | 1e-21 | 104 | 214 | 19 | 154 | NAC domain-containing protein 19 |
4dul_A | 1e-21 | 104 | 214 | 16 | 151 | NAC domain-containing protein 19 |
4dul_B | 1e-21 | 104 | 214 | 16 | 151 | NAC domain-containing protein 19 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3667 | 36 | 79 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 3e-27 | NAC domain containing protein 25 |