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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zjn_sc00016.1.g00150.1.sm.mkhc |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
WRKY |
| Protein Properties |
Length: 487aa MW: 51579.8 Da PI: 7.8651 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00016.1.g00150.1.sm.mkhc | genome | ZGD | View CDS |
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| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 104 | 8.2e-33 | 207 | 265 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
+DgynWrKYGqK+vkgse+prsYY+Ct+++C++kkkvers d++v++i+Y+g Hnh+k
Zjn_sc00016.1.g00150.1.sm.mkhc 207 EDGYNWRKYGQKQVKGSENPRSYYKCTYHSCSMKKKVERSLADGRVTQIVYKGAHNHPK 265
8********************************************************85 PP
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| 2 | WRKY | 103.8 | 9.2e-33 | 361 | 419 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDg++WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+ +d ++v++tYeg+Hnh+
Zjn_sc00016.1.g00150.1.sm.mkhc 361 LDDGFRWRKYGQKVVKGNPNPRSYYKCTTPGCPVRKHVERACHDSRAVITTYEGKHNHD 419
59********************************************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 487 aa
Download sequence Send
to blast |
MASSTGSLEH GGGGFTFTPP QFITSFTDLL SGAAGDMLSG ESPRSMFPRA GGNGGVPKFK 60
SAQPPRLPIS PPPMSPSSYF AIPAGLSPAE LLDSPVLLTS ASNFLASPTT GAIPAQGFYW 120
KQAADAIAAS QSQSQSQQES RADAGFSDFS FFTAGPDAVP TAQTASFPSF TKDQQVEQSA 180
APKVTVSSIN KSGGGGGGDG GNKKQLEDGY NWRKYGQKQV KGSENPRSYY KCTYHSCSMK 240
KKVERSLADG RVTQIVYKGA HNHPKPLSTR RNSSSGGVGG AADQDHHQQQ AAPGTEHAVA 300
TPENSTVTFG DEDGCGSQRS DGDEPDAKRW KEDGENEGSS GGKPVREPRL VVQTLSDIDI 360
LDDGFRWRKY GQKVVKGNPN PRSYYKCTTP GCPVRKHVER ACHDSRAVIT TYEGKHNHDV 420
PVGRGAASAS RAPPAPGPTN HHQHPYTLEM LPTSSDAGYG AGGAFQQRAA VAKDEPRDDL 480
FVDSLLC
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription repressor (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (By similarity). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000250|UniProtKB:Q6QHD1}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:25110688). Slightly down-regulated by gibberellic acid (GA) (By similarity). Accumulates in response to jasmonic acid (MeJA) (PubMed:16919842). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000269|PubMed:16919842, ECO:0000269|PubMed:25110688}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EU957097 | 1e-179 | EU957097.1 Zea mays clone 1582655 WRKY53 - superfamily of TFs having WRKY and zinc finger domains mRNA, complete cds. |
